RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
TRA2A-209ENST00000494255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
TRA2A-209ENST00000494255 RPS6KA4O75676 772 aa16.24■□□□□ 0.19
TRA2A-209ENST00000494255 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
TRA2A-209ENST00000494255 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
TRA2A-209ENST00000494255 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
TRA2A-209ENST00000494255 IL16Q14005 1332 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
TRA2A-209ENST00000494255 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 ADRA2BP18089 450 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 LAMB4A4D0S4 1761 aa16.22■□□□□ 0.19
TRA2A-209ENST00000494255 PRAMEF22A3QJZ6 481 aa16.21■□□□□ 0.19
TRA2A-209ENST00000494255 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
TRA2A-209ENST00000494255 ZBTB1Q9Y2K1 713 aa16.21■□□□□ 0.19
TRA2A-209ENST00000494255 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
TRA2A-209ENST00000494255 ZBTB7AO95365 584 aa16.21■□□□□ 0.18
TRA2A-209ENST00000494255 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.18
TRA2A-209ENST00000494255 SMIM5Q71RC9 77 aa16.21■□□□□ 0.18
TRA2A-209ENST00000494255 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.18
TRA2A-209ENST00000494255 MTFR1LQ9H019 292 aa16.21■□□□□ 0.18
TRA2A-209ENST00000494255 SPON1Q9HCB6 807 aa16.21■□□□□ 0.18
TRA2A-209ENST00000494255 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
TRA2A-209ENST00000494255 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
TRA2A-209ENST00000494255 RFC4P35249 363 aa16.19■□□□□ 0.18
TRA2A-209ENST00000494255 A1BGP04217 495 aa16.18■□□□□ 0.18
TRA2A-209ENST00000494255 ARHGEF1Q92888 912 aaKnown RBP16.18■□□□□ 0.18
TRA2A-209ENST00000494255 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
TRA2A-209ENST00000494255 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
TRA2A-209ENST00000494255 COL15A1P39059 1388 aa16.18■□□□□ 0.18
TRA2A-209ENST00000494255 A0A087WZG4 1122 aa16.17■□□□□ 0.18
TRA2A-209ENST00000494255 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
TRA2A-209ENST00000494255 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
TRA2A-209ENST00000494255 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
TRA2A-209ENST00000494255 LRP5O75197 1615 aa16.16■□□□□ 0.18
TRA2A-209ENST00000494255 ZPR1O75312 459 aa16.16■□□□□ 0.18
TRA2A-209ENST00000494255 HOXB7P09629 217 aa16.16■□□□□ 0.18
TRA2A-209ENST00000494255 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
TRA2A-209ENST00000494255 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
TRA2A-209ENST00000494255 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
TRA2A-209ENST00000494255 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
TRA2A-209ENST00000494255 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
TRA2A-209ENST00000494255 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
TRA2A-209ENST00000494255 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
TRA2A-209ENST00000494255 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
TRA2A-209ENST00000494255 POLD1P28340 1107 aa16.14■□□□□ 0.18
TRA2A-209ENST00000494255 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.18
TRA2A-209ENST00000494255 ARXQ96QS3 562 aa16.14■□□□□ 0.18
TRA2A-209ENST00000494255 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
TRA2A-209ENST00000494255 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
TRA2A-209ENST00000494255 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
TRA2A-209ENST00000494255 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
TRA2A-209ENST00000494255 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
TRA2A-209ENST00000494255 FANCIQ9NVI1 1328 aa16.14■□□□□ 0.17
TRA2A-209ENST00000494255 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
TRA2A-209ENST00000494255 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
TRA2A-209ENST00000494255 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
TRA2A-209ENST00000494255 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
TRA2A-209ENST00000494255 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
TRA2A-209ENST00000494255 SRP68Q9UHB9 627 aaKnown RBP16.13■□□□□ 0.17
TRA2A-209ENST00000494255 MYL6BP14649 208 aa16.12■□□□□ 0.17
TRA2A-209ENST00000494255 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.178e-8■□□□□ 9
TRA2A-209ENST00000494255 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
TRA2A-209ENST00000494255 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
TRA2A-209ENST00000494255 GYS1P13807 737 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
TRA2A-209ENST00000494255 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 E9PSI1 815 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 PTGER2P43116 358 aa16.11■□□□□ 0.17
TRA2A-209ENST00000494255 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
TRA2A-209ENST00000494255 SGIP1Q9BQI5 828 aa16.1■□□□□ 0.17
TRA2A-209ENST00000494255 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
TRA2A-209ENST00000494255 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
TRA2A-209ENST00000494255 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
TRA2A-209ENST00000494255 DDX21Q9NR30 783 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRA2A-209ENST00000494255 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
TRA2A-209ENST00000494255 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.17
TRA2A-209ENST00000494255 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.17
TRA2A-209ENST00000494255 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.17
TRA2A-209ENST00000494255 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.17
TRA2A-209ENST00000494255 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 MMP10P09238 476 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 FKBP8Q14318 412 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 PDIA6Q15084 440 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
TRA2A-209ENST00000494255 ANXA1P04083 346 aa16.07■□□□□ 0.16
TRA2A-209ENST00000494255 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
TRA2A-209ENST00000494255 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
TRA2A-209ENST00000494255 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
TRA2A-209ENST00000494255 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
TRA2A-209ENST00000494255 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
TRA2A-209ENST00000494255 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
TRA2A-209ENST00000494255 MAP3K15Q6ZN16 1313 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms