RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.11
RHBDF1-211ENST00000493647 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
RHBDF1-211ENST00000493647 TAF1LQ8IZX4 1826 aa15.71■□□□□ 0.11
RHBDF1-211ENST00000493647 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
RHBDF1-211ENST00000493647 EXOSC9Q06265 439 aaKnown RBP15.71■□□□□ 0.11
RHBDF1-211ENST00000493647 C4BP0C0L5 1744 aa15.71■□□□□ 0.1
RHBDF1-211ENST00000493647 A1BGP04217 495 aa15.7■□□□□ 0.1
RHBDF1-211ENST00000493647 RC3H1Q5TC82 1133 aaKnown RBP15.7■□□□□ 0.1
RHBDF1-211ENST00000493647 TEX13AQ9BXU3 409 aaPredicted RBP15.7■□□□□ 0.1
RHBDF1-211ENST00000493647 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
RHBDF1-211ENST00000493647 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
RHBDF1-211ENST00000493647 NBPF26B4DH59 902 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 STARD3NLO95772 234 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 PIP4K2AP48426 406 aaPredicted RBP15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 SLC15A2Q16348 729 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 NBPF10Q6P3W6 841 aaKnown RBP15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 NBPF15Q8N660 670 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
RHBDF1-211ENST00000493647 GNPATO15228 680 aa15.68■□□□□ 0.1
RHBDF1-211ENST00000493647 HOXB7P09629 217 aa15.68■□□□□ 0.1
RHBDF1-211ENST00000493647 EIF2S2P20042 333 aaKnown RBP15.68■□□□□ 0.1
RHBDF1-211ENST00000493647 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
RHBDF1-211ENST00000493647 AK7Q96M32 723 aa15.68■□□□□ 0.1
RHBDF1-211ENST00000493647 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 RPS6KA4O75676 772 aa15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 PDIA6Q15084 440 aa15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 PNPLA7Q6ZV29 1317 aa15.67■□□□□ 0.1
RHBDF1-211ENST00000493647 VAMP4O75379 141 aa15.66■□□□□ 0.1
RHBDF1-211ENST00000493647 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
RHBDF1-211ENST00000493647 R3HDM1Q15032 1099 aaKnown RBP15.66■□□□□ 0.1
RHBDF1-211ENST00000493647 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
RHBDF1-211ENST00000493647 HDGFL1Q5TGJ6 251 aa15.66■□□□□ 0.1
RHBDF1-211ENST00000493647 ANXA1P04083 346 aa15.65■□□□□ 0.1
RHBDF1-211ENST00000493647 LRP10Q7Z4F1 713 aa15.65■□□□□ 0.1
RHBDF1-211ENST00000493647 PDGFDQ9GZP0 370 aaPredicted RBP15.65■□□□□ 0.1
RHBDF1-211ENST00000493647 TFCP2L1Q9NZI6 479 aa15.65■□□□□ 0.1
RHBDF1-211ENST00000493647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 PHF14O94880 888 aa15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 CHPF2Q9P2E5 772 aa15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
RHBDF1-211ENST00000493647 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
RHBDF1-211ENST00000493647 HMGB2P26583 209 aaKnown RBP15.63■□□□□ 0.09
RHBDF1-211ENST00000493647 SSFA2P28290 1259 aa15.63■□□□□ 0.09
RHBDF1-211ENST00000493647 COL23A1Q86Y22 540 aaPredicted RBP15.63■□□□□ 0.09
RHBDF1-211ENST00000493647 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
RHBDF1-211ENST00000493647 MYL6BP14649 208 aa15.62■□□□□ 0.09
RHBDF1-211ENST00000493647 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
RHBDF1-211ENST00000493647 ARHGEF1Q92888 912 aaKnown RBP15.62■□□□□ 0.09
RHBDF1-211ENST00000493647 COL15A1P39059 1388 aa15.62■□□□□ 0.09
RHBDF1-211ENST00000493647 DDX21Q9NR30 783 aaKnown RBP eCLIP15.61■□□□□ 0.09
RHBDF1-211ENST00000493647 ZNF330Q9Y3S2 320 aaPredicted RBP15.61■□□□□ 0.09
RHBDF1-211ENST00000493647 ADRA2BP18089 450 aa15.6■□□□□ 0.09
RHBDF1-211ENST00000493647 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
RHBDF1-211ENST00000493647 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
RHBDF1-211ENST00000493647 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
RHBDF1-211ENST00000493647 TTLL7Q6ZT98 887 aa15.59■□□□□ 0.09
RHBDF1-211ENST00000493647 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
RHBDF1-211ENST00000493647 DBF4Q9UBU7 674 aaPredicted RBP15.59■□□□□ 0.09
RHBDF1-211ENST00000493647 QSER1Q2KHR3 1735 aa15.59■□□□□ 0.09
RHBDF1-211ENST00000493647 G2E3Q7L622 706 aa15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 PHAXQ9H814 394 aaKnown RBP15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 TBC1D2BQ9UPU7 963 aa15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
RHBDF1-211ENST00000493647 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 CAMTA2O94983 1202 aa15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 CT47B1P0C2W7 299 aaPredicted RBP15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 DZIP3Q86Y13 1208 aaKnown RBP15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 SSH1Q8WYL5 1049 aa15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
RHBDF1-211ENST00000493647 A0A087WZG4 1122 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 MSH5O43196 834 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 RFC4P35249 363 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 COPS6Q7L5N1 327 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 MRPL50Q8N5N7 158 aaKnown RBP15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 BCL2L13Q9BXK5 485 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 NARFQ9UHQ1 456 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
RHBDF1-211ENST00000493647 GYS1P13807 737 aa15.55■□□□□ 0.08
RHBDF1-211ENST00000493647 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
RHBDF1-211ENST00000493647 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
RHBDF1-211ENST00000493647 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
RHBDF1-211ENST00000493647 ZBTB7AO95365 584 aa15.54■□□□□ 0.08
RHBDF1-211ENST00000493647 HLFQ16534 295 aa15.54■□□□□ 0.08
RHBDF1-211ENST00000493647 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
RHBDF1-211ENST00000493647 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
RHBDF1-211ENST00000493647 ARXQ96QS3 562 aa15.54■□□□□ 0.08
RHBDF1-211ENST00000493647 MAP3K15Q6ZN16 1313 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms