RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PDGFDQ9GZP0 370 aaPredicted RBP21.96■■□□□ 1.11
RER1-208ENST00000493207 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
RER1-208ENST00000493207 STARD3NLO95772 234 aa21.95■■□□□ 1.1
RER1-208ENST00000493207 CCDC87Q9NVE4 849 aa21.95■■□□□ 1.1
RER1-208ENST00000493207 GIGYF1O75420 1035 aaPredicted RBP21.94■■□□□ 1.1
RER1-208ENST00000493207 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
RER1-208ENST00000493207 USP16Q9Y5T5 823 aa21.94■■□□□ 1.1
RER1-208ENST00000493207 IL16Q14005 1332 aa21.93■■□□□ 1.1
RER1-208ENST00000493207 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
RER1-208ENST00000493207 RTCBQ9Y3I0 505 aaKnown RBP21.93■■□□□ 1.1
RER1-208ENST00000493207 MSH5O43196 834 aa21.92■■□□□ 1.1
RER1-208ENST00000493207 SSFA2P28290 1259 aa21.92■■□□□ 1.1
RER1-208ENST00000493207 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
RER1-208ENST00000493207 COL23A1Q86Y22 540 aaPredicted RBP21.92■■□□□ 1.1
RER1-208ENST00000493207 ZBTB1Q9Y2K1 713 aa21.92■■□□□ 1.1
RER1-208ENST00000493207 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
RER1-208ENST00000493207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.91■■□□□ 1.1
RER1-208ENST00000493207 RPS6KA4O75676 772 aa21.91■■□□□ 1.1
RER1-208ENST00000493207 FLAD1Q8NFF5 587 aa21.91■■□□□ 1.1
RER1-208ENST00000493207 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
RER1-208ENST00000493207 ZNF521Q96K83 1311 aa21.9■■□□□ 1.1
RER1-208ENST00000493207 A1BGP04217 495 aa21.9■■□□□ 1.1
RER1-208ENST00000493207 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
RER1-208ENST00000493207 TRAPPC3LQ5T215 181 aa21.89■■□□□ 1.09
RER1-208ENST00000493207 SOS1Q07889 1333 aaPredicted RBP21.88■■□□□ 1.09
RER1-208ENST00000493207 ZBTB7AO95365 584 aa21.88■■□□□ 1.09
RER1-208ENST00000493207 PIP4K2AP48426 406 aaPredicted RBP21.88■■□□□ 1.09
RER1-208ENST00000493207 SPINK5Q9NQ38 1064 aaPredicted RBP21.88■■□□□ 1.09
RER1-208ENST00000493207 ADRA2BP18089 450 aa21.87■■□□□ 1.09
RER1-208ENST00000493207 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
RER1-208ENST00000493207 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
RER1-208ENST00000493207 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
RER1-208ENST00000493207 ZNF330Q9Y3S2 320 aaPredicted RBP21.86■■□□□ 1.09
RER1-208ENST00000493207 COL15A1P39059 1388 aa21.86■■□□□ 1.09
RER1-208ENST00000493207 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
RER1-208ENST00000493207 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
RER1-208ENST00000493207 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
RER1-208ENST00000493207 RFC4P35249 363 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 SLC16A10Q8TF71 515 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 NECTIN2Q92692 538 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
RER1-208ENST00000493207 ATF5Q9Y2D1 282 aaPredicted RBP21.84■■□□□ 1.09
RER1-208ENST00000493207 NBPF26B4DH59 902 aa21.83■■□□□ 1.09
RER1-208ENST00000493207 HOXB7P09629 217 aa21.83■■□□□ 1.09
RER1-208ENST00000493207 IL6STP40189 918 aaPredicted RBP21.83■■□□□ 1.09
RER1-208ENST00000493207 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
RER1-208ENST00000493207 NBPF10Q6P3W6 841 aaKnown RBP21.83■■□□□ 1.09
RER1-208ENST00000493207 NBPF15Q8N660 670 aa21.83■■□□□ 1.09
RER1-208ENST00000493207 MYH16Q9H6N6 1097 aa21.83■■□□□ 1.09
RER1-208ENST00000493207 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
RER1-208ENST00000493207 COL24A1Q17RW2 1714 aa21.82■■□□□ 1.08
RER1-208ENST00000493207 HDGFL1Q5TGJ6 251 aa21.81■■□□□ 1.08
RER1-208ENST00000493207 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
RER1-208ENST00000493207 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
RER1-208ENST00000493207 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
RER1-208ENST00000493207 SRP68Q9UHB9 627 aaKnown RBP21.81■■□□□ 1.08
RER1-208ENST00000493207 LRP5O75197 1615 aa21.8■■□□□ 1.08
RER1-208ENST00000493207 MYL6BP14649 208 aa21.8■■□□□ 1.08
RER1-208ENST00000493207 ERBB4Q15303 1308 aa21.8■■□□□ 1.08
RER1-208ENST00000493207 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
RER1-208ENST00000493207 SCN7AQ01118 1682 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 A0A087WZG4 1122 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 E9PSI1 815 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 ZPR1O75312 459 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 ARXQ96QS3 562 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
RER1-208ENST00000493207 EXOSC9Q06265 439 aaKnown RBP21.78■■□□□ 1.08
RER1-208ENST00000493207 TBC1D2BQ9UPU7 963 aa21.78■■□□□ 1.08
RER1-208ENST00000493207 ANXA1P04083 346 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 GYS1P13807 737 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 SLFN5Q08AF3 891 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 PDIA6Q15084 440 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 PROSER3Q2NL68 480 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 TWISTNBQ3B726 338 aaPredicted RBP21.77■■□□□ 1.08
RER1-208ENST00000493207 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 CHPF2Q9P2E5 772 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
RER1-208ENST00000493207 DZIP3Q86Y13 1208 aaKnown RBP21.76■■□□□ 1.07
RER1-208ENST00000493207 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
RER1-208ENST00000493207 PTGER2P43116 358 aa21.75■■□□□ 1.07
RER1-208ENST00000493207 SGIP1Q9BQI5 828 aa21.74■■□□□ 1.07
RER1-208ENST00000493207 DDX21Q9NR30 783 aaKnown RBP eCLIP21.74■■□□□ 1.07
RER1-208ENST00000493207 DBF4Q9UBU7 674 aaPredicted RBP21.74■■□□□ 1.07
RER1-208ENST00000493207 POLD1P28340 1107 aa21.73■■□□□ 1.07
RER1-208ENST00000493207 FKBP8Q14318 412 aa21.73■■□□□ 1.07
RER1-208ENST00000493207 CCDC30Q5VVM6 783 aa21.73■■□□□ 1.07
RER1-208ENST00000493207 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
RER1-208ENST00000493207 NLGN1Q8N2Q7 840 aa21.73■■□□□ 1.07
RER1-208ENST00000493207 CAMTA2O94983 1202 aa21.72■■□□□ 1.07
RER1-208ENST00000493207 BCL2L12Q9HB09 334 aa21.72■■□□□ 1.07
RER1-208ENST00000493207 ZBED9Q6R2W3 1325 aa21.72■■□□□ 1.07
RER1-208ENST00000493207 VAMP4O75379 141 aa21.71■■□□□ 1.07
RER1-208ENST00000493207 KIF6Q6ZMV9 814 aa21.71■■□□□ 1.07
RER1-208ENST00000493207 TTLL7Q6ZT98 887 aa21.71■■□□□ 1.07
RER1-208ENST00000493207 TRMT2AQ8IZ69 625 aaKnown RBP21.71■■□□□ 1.07
RER1-208ENST00000493207 CHMP4AQ9BY43 222 aa21.71■■□□□ 1.07
RER1-208ENST00000493207 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms