RNA–Protein interactions for RNA: ENST00000492305.1

TSPAN9-205, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-205ENST00000492305 ATP6V1AP38606 617 aa15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
TSPAN9-205ENST00000492305 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 SLFN5Q08AF3 891 aa15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 LINC00116Q8NCU8 138 aa15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 C4AP0C0L4 1744 aa15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 ZNF831Q5JPB2 1677 aa15.5■□□□□ 0.07
TSPAN9-205ENST00000492305 E9PSI1 815 aa15.49■□□□□ 0.07
TSPAN9-205ENST00000492305 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
TSPAN9-205ENST00000492305 COL23A1Q86Y22 540 aaPredicted RBP15.49■□□□□ 0.07
TSPAN9-205ENST00000492305 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
TSPAN9-205ENST00000492305 FHDC1Q9C0D6 1143 aaPredicted RBP15.49■□□□□ 0.07
TSPAN9-205ENST00000492305 ZBED9Q6R2W3 1325 aa15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 RC3H1Q5TC82 1133 aaKnown RBP15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 ARXQ96QS3 562 aa15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 SGIP1Q9BQI5 828 aa15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
TSPAN9-205ENST00000492305 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 GNPATO15228 680 aa15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 POLD1P28340 1107 aa15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 TSR2Q969E8 191 aaKnown RBP15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 MYH14Q7Z406 1995 aaKnown RBP15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 DLG5Q8TDM6 1919 aa15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
TSPAN9-205ENST00000492305 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 STARD3NLO95772 234 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 HOXB7P09629 217 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 UBR2Q8IWV8 1755 aa15.46■□□□□ 0.07
TSPAN9-205ENST00000492305 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.06
TSPAN9-205ENST00000492305 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
TSPAN9-205ENST00000492305 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 UTRNP46939 3433 aa15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 DUSP27Q5VZP5 1158 aa15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 SLC16A10Q8TF71 515 aa15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
TSPAN9-205ENST00000492305 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
TSPAN9-205ENST00000492305 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
TSPAN9-205ENST00000492305 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
TSPAN9-205ENST00000492305 VAMP4O75379 141 aa15.42■□□□□ 0.06
TSPAN9-205ENST00000492305 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
TSPAN9-205ENST00000492305 A1BGP04217 495 aa15.42■□□□□ 0.06
TSPAN9-205ENST00000492305 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
TSPAN9-205ENST00000492305 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
TSPAN9-205ENST00000492305 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
TSPAN9-205ENST00000492305 NBPF26B4DH59 902 aa15.41■□□□□ 0.06
TSPAN9-205ENST00000492305 NBPF10Q6P3W6 841 aaKnown RBP15.41■□□□□ 0.06
TSPAN9-205ENST00000492305 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
TSPAN9-205ENST00000492305 NBPF15Q8N660 670 aa15.41■□□□□ 0.06
TSPAN9-205ENST00000492305 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 SSFA2P28290 1259 aa15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 PDIA6Q15084 440 aa15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 ERBB4Q15303 1308 aa15.4■□□□□ 0.06
TSPAN9-205ENST00000492305 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
TSPAN9-205ENST00000492305 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
TSPAN9-205ENST00000492305 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
TSPAN9-205ENST00000492305 ZBTB1Q9Y2K1 713 aa15.39■□□□□ 0.05
TSPAN9-205ENST00000492305 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 LRP10Q7Z4F1 713 aa15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 CHD4Q14839 1912 aa15.38■□□□□ 0.05
TSPAN9-205ENST00000492305 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
TSPAN9-205ENST00000492305 CANXP27824 592 aaKnown RBP15.37■□□□□ 0.05
TSPAN9-205ENST00000492305 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
TSPAN9-205ENST00000492305 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
TSPAN9-205ENST00000492305 N4BP2Q86UW6 1770 aaPredicted RBP15.35■□□□□ 0.05
TSPAN9-205ENST00000492305 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
TSPAN9-205ENST00000492305 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
TSPAN9-205ENST00000492305 A0A087WZG4 1122 aa15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 YY1P25490 414 aa15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 NECTIN2Q92692 538 aa15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 YTHDC1Q96MU7 727 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
TSPAN9-205ENST00000492305 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
TSPAN9-205ENST00000492305 RFC4P35249 363 aa15.33■□□□□ 0.04
TSPAN9-205ENST00000492305 GPR162Q16538 588 aa15.33■□□□□ 0.04
TSPAN9-205ENST00000492305 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms