RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 CNTNAP4Q9C0A0 1308 aa30.14■■■□□ 2.42
SCN5A-213ENST00000491944 TFCP2L1Q9NZI6 479 aa30.14■■■□□ 2.41
SCN5A-213ENST00000491944 USP16Q9Y5T5 823 aa30.14■■■□□ 2.41
SCN5A-213ENST00000491944 GNPATO15228 680 aa30.12■■■□□ 2.41
SCN5A-213ENST00000491944 RC3H1Q5TC82 1133 aaKnown RBP30.12■■■□□ 2.41
SCN5A-213ENST00000491944 CCDC87Q9NVE4 849 aa30.12■■■□□ 2.41
SCN5A-213ENST00000491944 UBR3Q6ZT12 1888 aa30.11■■■□□ 2.41
SCN5A-213ENST00000491944 E9PSI1 815 aa30.11■■■□□ 2.41
SCN5A-213ENST00000491944 R3HDM1Q15032 1099 aaKnown RBP30.11■■■□□ 2.41
SCN5A-213ENST00000491944 DUSP27Q5VZP5 1158 aa30.1■■■□□ 2.41
SCN5A-213ENST00000491944 CDCA7LQ96GN5 454 aa30.1■■■□□ 2.41
SCN5A-213ENST00000491944 INTS5Q6P9B9 1019 aaKnown RBP30.09■■■□□ 2.41
SCN5A-213ENST00000491944 ZBED9Q6R2W3 1325 aa30.09■■■□□ 2.41
SCN5A-213ENST00000491944 QSER1Q2KHR3 1735 aa30.08■■■□□ 2.41
SCN5A-213ENST00000491944 PSDA5PKW4 1024 aaPredicted RBP30.08■■■□□ 2.41
SCN5A-213ENST00000491944 ELL2O00472 640 aaPredicted RBP30.08■■■□□ 2.41
SCN5A-213ENST00000491944 C8orf58Q8NAV2 365 aa30.08■■■□□ 2.41
SCN5A-213ENST00000491944 A1BGP04217 495 aa30.07■■■□□ 2.4
SCN5A-213ENST00000491944 EIF2S2P20042 333 aaKnown RBP30.07■■■□□ 2.4
SCN5A-213ENST00000491944 SLFN5Q08AF3 891 aa30.07■■■□□ 2.4
SCN5A-213ENST00000491944 ZBTB1Q9Y2K1 713 aa30.07■■■□□ 2.4
SCN5A-213ENST00000491944 PHF14O94880 888 aa30.06■■■□□ 2.4
SCN5A-213ENST00000491944 HOXB7P09629 217 aa30.06■■■□□ 2.4
SCN5A-213ENST00000491944 CANXP27824 592 aaKnown RBP30.06■■■□□ 2.4
SCN5A-213ENST00000491944 RTCBQ9Y3I0 505 aaKnown RBP30.06■■■□□ 2.4
SCN5A-213ENST00000491944 SMIM5Q71RC9 77 aa30.05■■■□□ 2.4
SCN5A-213ENST00000491944 AMIGO3Q86WK7 504 aa30.05■■■□□ 2.4
SCN5A-213ENST00000491944 NECTIN2Q92692 538 aa30.05■■■□□ 2.4
SCN5A-213ENST00000491944 RPS6KA4O75676 772 aa30.04■■■□□ 2.4
SCN5A-213ENST00000491944 EXOSC9Q06265 439 aaKnown RBP30.04■■■□□ 2.4
SCN5A-213ENST00000491944 TSPYL6Q8N831 410 aa30.04■■■□□ 2.4
SCN5A-213ENST00000491944 YTHDC1Q96MU7 727 aaKnown RBP30.04■■■□□ 2.4
SCN5A-213ENST00000491944 PIP4K2AP48426 406 aaPredicted RBP30.03■■■□□ 2.4
SCN5A-213ENST00000491944 PNPLA7Q6ZV29 1317 aa30.03■■■□□ 2.4
SCN5A-213ENST00000491944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.03■■■□□ 2.4
SCN5A-213ENST00000491944 HDGFL1Q5TGJ6 251 aa30.03■■■□□ 2.4
SCN5A-213ENST00000491944 ZNF330Q9Y3S2 320 aaPredicted RBP30.03■■■□□ 2.4
SCN5A-213ENST00000491944 MSH5O43196 834 aa30.02■■■□□ 2.4
SCN5A-213ENST00000491944 SSFA2P28290 1259 aa30.02■■■□□ 2.4
SCN5A-213ENST00000491944 TWISTNBQ3B726 338 aaPredicted RBP30.02■■■□□ 2.4
SCN5A-213ENST00000491944 SOS1Q07889 1333 aaPredicted RBP30.01■■■□□ 2.39
SCN5A-213ENST00000491944 FLAD1Q8NFF5 587 aa30.01■■■□□ 2.39
SCN5A-213ENST00000491944 NBPF26B4DH59 902 aa29.99■■■□□ 2.39
SCN5A-213ENST00000491944 TRAPPC3LQ5T215 181 aa29.99■■■□□ 2.39
SCN5A-213ENST00000491944 NBPF10Q6P3W6 841 aaKnown RBP29.99■■■□□ 2.39
SCN5A-213ENST00000491944 COL23A1Q86Y22 540 aaPredicted RBP29.99■■■□□ 2.39
SCN5A-213ENST00000491944 NBPF15Q8N660 670 aa29.99■■■□□ 2.39
SCN5A-213ENST00000491944 COL15A1P39059 1388 aa29.98■■■□□ 2.39
SCN5A-213ENST00000491944 ERBB4Q15303 1308 aa29.98■■■□□ 2.39
SCN5A-213ENST00000491944 ADRA2BP18089 450 aa29.98■■■□□ 2.39
SCN5A-213ENST00000491944 IL6STP40189 918 aaPredicted RBP29.98■■■□□ 2.39
SCN5A-213ENST00000491944 NPM2Q86SE8 214 aaKnown RBP29.98■■■□□ 2.39
SCN5A-213ENST00000491944 TRMT2AQ8IZ69 625 aaKnown RBP29.98■■■□□ 2.39
SCN5A-213ENST00000491944 PDGFDQ9GZP0 370 aaPredicted RBP29.98■■■□□ 2.39
SCN5A-213ENST00000491944 C4AP0C0L4 1744 aa29.98■■■□□ 2.39
SCN5A-213ENST00000491944 CASZ1Q86V15 1759 aa29.97■■■□□ 2.39
SCN5A-213ENST00000491944 MYL6BP14649 208 aa29.96■■■□□ 2.39
SCN5A-213ENST00000491944 EIF5P55010 431 aaKnown RBP29.96■■■□□ 2.39
SCN5A-213ENST00000491944 ARHGEF1Q92888 912 aaKnown RBP29.95■■■□□ 2.39
SCN5A-213ENST00000491944 CHPF2Q9P2E5 772 aa29.95■■■□□ 2.39
SCN5A-213ENST00000491944 RFC4P35249 363 aa29.94■■■□□ 2.38
SCN5A-213ENST00000491944 CHMP4AQ9BY43 222 aa29.94■■■□□ 2.38
SCN5A-213ENST00000491944 ANXA1P04083 346 aa29.93■■■□□ 2.38
SCN5A-213ENST00000491944 CCDC30Q5VVM6 783 aa29.93■■■□□ 2.38
SCN5A-213ENST00000491944 ARXQ96QS3 562 aa29.93■■■□□ 2.38
SCN5A-213ENST00000491944 A0A087WZG4 1122 aa29.92■■■□□ 2.38
SCN5A-213ENST00000491944 VAMP4O75379 141 aa29.92■■■□□ 2.38
SCN5A-213ENST00000491944 PDIA6Q15084 440 aa29.92■■■□□ 2.38
SCN5A-213ENST00000491944 PROSER3Q2NL68 480 aa29.92■■■□□ 2.38
SCN5A-213ENST00000491944 DDX21Q9NR30 783 aaKnown RBP eCLIP29.92■■■□□ 2.38
SCN5A-213ENST00000491944 DBF4Q9UBU7 674 aaPredicted RBP29.91■■■□□ 2.38
SCN5A-213ENST00000491944 TCERG1O14776 1098 aaKnown RBP29.9■■■□□ 2.38
SCN5A-213ENST00000491944 STK31Q9BXU1 1019 aa29.9■■■□□ 2.38
SCN5A-213ENST00000491944 ZPR1O75312 459 aa29.89■■■□□ 2.37
SCN5A-213ENST00000491944 SRP68Q9UHB9 627 aaKnown RBP29.89■■■□□ 2.37
SCN5A-213ENST00000491944 TBC1D2BQ9UPU7 963 aa29.89■■■□□ 2.37
SCN5A-213ENST00000491944 ZBTB7AO95365 584 aa29.88■■■□□ 2.37
SCN5A-213ENST00000491944 DZIP3Q86Y13 1208 aaKnown RBP29.88■■■□□ 2.37
SCN5A-213ENST00000491944 USP42Q9H9J4 1324 aaKnown RBP29.87■■■□□ 2.37
SCN5A-213ENST00000491944 SLC16A10Q8TF71 515 aa29.87■■■□□ 2.37
SCN5A-213ENST00000491944 HYPKQ9NX55 129 aa29.86■■■□□ 2.37
SCN5A-213ENST00000491944 NARFQ9UHQ1 456 aa29.86■■■□□ 2.37
SCN5A-213ENST00000491944 USPL1Q5W0Q7 1092 aa29.85■■■□□ 2.37
SCN5A-213ENST00000491944 MSL1Q68DK7 614 aa29.85■■■□□ 2.37
SCN5A-213ENST00000491944 LRP10Q7Z4F1 713 aa29.85■■■□□ 2.37
SCN5A-213ENST00000491944 SCN7AQ01118 1682 aa29.84■■■□□ 2.37
SCN5A-213ENST00000491944 AIMP1Q12904 312 aaKnown RBP29.84■■■□□ 2.37
SCN5A-213ENST00000491944 KIF6Q6ZMV9 814 aa29.84■■■□□ 2.37
SCN5A-213ENST00000491944 XAGE3Q8WTP9 111 aa29.84■■■□□ 2.37
SCN5A-213ENST00000491944 CACNA1FO60840 1977 aa29.84■■■□□ 2.37
SCN5A-213ENST00000491944 BCORQ6W2J9 1755 aa29.83■■■□□ 2.37
SCN5A-213ENST00000491944 TTLL7Q6ZT98 887 aa29.83■■■□□ 2.37
SCN5A-213ENST00000491944 MTFR1LQ9H019 292 aa29.83■■■□□ 2.37
SCN5A-213ENST00000491944 CT47B1P0C2W7 299 aaPredicted RBP29.82■■■□□ 2.36
SCN5A-213ENST00000491944 COPS6Q7L5N1 327 aa29.82■■■□□ 2.36
SCN5A-213ENST00000491944 ATF5Q9Y2D1 282 aaPredicted RBP29.82■■■□□ 2.36
SCN5A-213ENST00000491944 CAMTA2O94983 1202 aa29.81■■■□□ 2.36
SCN5A-213ENST00000491944 SLC4A2P04920 1241 aa29.81■■■□□ 2.36
SCN5A-213ENST00000491944 GYS1P13807 737 aa29.81■■■□□ 2.36
SCN5A-213ENST00000491944 PHAXQ9H814 394 aaKnown RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms