RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 TWISTNBQ3B726 338 aaPredicted RBP28.08■■■□□ 2.09
NOTCH4-205ENST00000491215 TSPYL6Q8N831 410 aa28.08■■■□□ 2.09
NOTCH4-205ENST00000491215 HOXB7P09629 217 aa28.07■■■□□ 2.08
NOTCH4-205ENST00000491215 CYP19A1P11511 503 aaPredicted RBP28.07■■■□□ 2.08
NOTCH4-205ENST00000491215 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
NOTCH4-205ENST00000491215 CRKLP46109 303 aaKnown RBP28.06■■■□□ 2.08
NOTCH4-205ENST00000491215 NECTIN2Q92692 538 aa28.06■■■□□ 2.08
NOTCH4-205ENST00000491215 HDGFL1Q5TGJ6 251 aa28.05■■■□□ 2.08
NOTCH4-205ENST00000491215 AK7Q96M32 723 aa28.05■■■□□ 2.08
NOTCH4-205ENST00000491215 SOS1Q07889 1333 aaPredicted RBP28.04■■■□□ 2.08
NOTCH4-205ENST00000491215 CNTNAP4Q9C0A0 1308 aa28.04■■■□□ 2.08
NOTCH4-205ENST00000491215 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
NOTCH4-205ENST00000491215 CCDC87Q9NVE4 849 aa28.03■■■□□ 2.08
NOTCH4-205ENST00000491215 MYH14Q7Z406 1995 aaKnown RBP28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 A1BGP04217 495 aa28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 ZNF827Q17R98 1081 aa28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 NBPF14Q5TI25 921 aa28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 ANO8Q9HCE9 1232 aaPredicted RBP28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 STK32BQ9NY57 414 aa28.02■■■□□ 2.08
NOTCH4-205ENST00000491215 GNPATO15228 680 aa28.01■■■□□ 2.07
NOTCH4-205ENST00000491215 RC3H1Q5TC82 1133 aaKnown RBP28.01■■■□□ 2.07
NOTCH4-205ENST00000491215 CANXP27824 592 aaKnown RBP28■■■□□ 2.07
NOTCH4-205ENST00000491215 PIP4K2AP48426 406 aaPredicted RBP28■■■□□ 2.07
NOTCH4-205ENST00000491215 INTS5Q6P9B9 1019 aaKnown RBP28■■■□□ 2.07
NOTCH4-205ENST00000491215 AKT1S1Q96B36 256 aa28■■■□□ 2.07
NOTCH4-205ENST00000491215 TFCP2L1Q9NZI6 479 aa28■■■□□ 2.07
NOTCH4-205ENST00000491215 ZBTB1Q9Y2K1 713 aa28■■■□□ 2.07
NOTCH4-205ENST00000491215 VAMP4O75379 141 aa28■■■□□ 2.07
NOTCH4-205ENST00000491215 CHMP4AQ9BY43 222 aa27.99■■■□□ 2.07
NOTCH4-205ENST00000491215 ZNF330Q9Y3S2 320 aaPredicted RBP27.99■■■□□ 2.07
NOTCH4-205ENST00000491215 SLC15A2Q16348 729 aa27.98■■■□□ 2.07
NOTCH4-205ENST00000491215 CCDC30Q5VVM6 783 aa27.98■■■□□ 2.07
NOTCH4-205ENST00000491215 RTCBQ9Y3I0 505 aaKnown RBP27.97■■■□□ 2.07
NOTCH4-205ENST00000491215 PHF14O94880 888 aa27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 MYL6BP14649 208 aa27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 CHPF2Q9P2E5 772 aa27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 UBR3Q6ZT12 1888 aa27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 ERBB4Q15303 1308 aa27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 TCERG1O14776 1098 aaKnown RBP27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
NOTCH4-205ENST00000491215 NBPF26B4DH59 902 aa27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 NBPF10Q6P3W6 841 aaKnown RBP27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 NBPF15Q8N660 670 aa27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 STK31Q9BXU1 1019 aa27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 DBF4Q9UBU7 674 aaPredicted RBP27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 TUBGCP6Q96RT7 1819 aa27.95■■■□□ 2.06
NOTCH4-205ENST00000491215 RPS6KA4O75676 772 aa27.94■■■□□ 2.06
NOTCH4-205ENST00000491215 ANXA1P04083 346 aa27.93■■■□□ 2.06
NOTCH4-205ENST00000491215 CT47B1P0C2W7 299 aaPredicted RBP27.93■■■□□ 2.06
NOTCH4-205ENST00000491215 IL6STP40189 918 aaPredicted RBP27.93■■■□□ 2.06
NOTCH4-205ENST00000491215 SMIM5Q71RC9 77 aa27.93■■■□□ 2.06
NOTCH4-205ENST00000491215 PROSER3Q2NL68 480 aa27.92■■■□□ 2.06
NOTCH4-205ENST00000491215 AMIGO3Q86WK7 504 aa27.92■■■□□ 2.06
NOTCH4-205ENST00000491215 DDX21Q9NR30 783 aaKnown RBP eCLIP27.92■■■□□ 2.06
NOTCH4-205ENST00000491215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.92■■■□□ 2.06
NOTCH4-205ENST00000491215 PDIA6Q15084 440 aa27.92■■■□□ 2.06
NOTCH4-205ENST00000491215 COL15A1P39059 1388 aa27.91■■■□□ 2.06
NOTCH4-205ENST00000491215 SSFA2P28290 1259 aa27.91■■■□□ 2.06
NOTCH4-205ENST00000491215 ZNF428Q96B54 188 aa27.9■■■□□ 2.06
NOTCH4-205ENST00000491215 ARXQ96QS3 562 aa27.9■■■□□ 2.06
NOTCH4-205ENST00000491215 EIF5P55010 431 aaKnown RBP27.89■■■□□ 2.06
NOTCH4-205ENST00000491215 TRAPPC3LQ5T215 181 aa27.89■■■□□ 2.06
NOTCH4-205ENST00000491215 MSH5O43196 834 aa27.89■■■□□ 2.05
NOTCH4-205ENST00000491215 ADRA2BP18089 450 aa27.89■■■□□ 2.05
NOTCH4-205ENST00000491215 R3HDM1Q15032 1099 aaKnown RBP27.89■■■□□ 2.05
NOTCH4-205ENST00000491215 QSER1Q2KHR3 1735 aa27.88■■■□□ 2.05
NOTCH4-205ENST00000491215 PNPLA7Q6ZV29 1317 aa27.88■■■□□ 2.05
NOTCH4-205ENST00000491215 SLC4A2P04920 1241 aa27.88■■■□□ 2.05
NOTCH4-205ENST00000491215 FLAD1Q8NFF5 587 aa27.88■■■□□ 2.05
NOTCH4-205ENST00000491215 HYPKQ9NX55 129 aa27.88■■■□□ 2.05
NOTCH4-205ENST00000491215 BCL2L13Q9BXK5 485 aa27.87■■■□□ 2.05
NOTCH4-205ENST00000491215 RFC4P35249 363 aa27.86■■■□□ 2.05
NOTCH4-205ENST00000491215 ARHGEF1Q92888 912 aaKnown RBP27.86■■■□□ 2.05
NOTCH4-205ENST00000491215 C4AP0C0L4 1744 aa27.86■■■□□ 2.05
NOTCH4-205ENST00000491215 A0A087WZG4 1122 aa27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 AIMP1Q12904 312 aaKnown RBP27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 SSH1Q8WYL5 1049 aa27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 SMC4Q9NTJ3 1288 aa27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 PSDA5PKW4 1024 aaPredicted RBP27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 LRP10Q7Z4F1 713 aa27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 COL23A1Q86Y22 540 aaPredicted RBP27.85■■■□□ 2.05
NOTCH4-205ENST00000491215 CACNA1FO60840 1977 aa27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 ALDH1L2Q3SY69 923 aa27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 DZIP3Q86Y13 1208 aaKnown RBP27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 XAGE3Q8WTP9 111 aa27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 PHAXQ9H814 394 aaKnown RBP27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 TBC1D2BQ9UPU7 963 aa27.84■■■□□ 2.05
NOTCH4-205ENST00000491215 COPS6Q7L5N1 327 aa27.83■■■□□ 2.05
NOTCH4-205ENST00000491215 RARSP54136 660 aaKnown RBP27.82■■■□□ 2.04
NOTCH4-205ENST00000491215 KIF6Q6ZMV9 814 aa27.82■■■□□ 2.04
NOTCH4-205ENST00000491215 ZPR1O75312 459 aa27.81■■■□□ 2.04
NOTCH4-205ENST00000491215 TTLL7Q6ZT98 887 aa27.81■■■□□ 2.04
NOTCH4-205ENST00000491215 PDGFDQ9GZP0 370 aaPredicted RBP27.8■■■□□ 2.04
NOTCH4-205ENST00000491215 USP42Q9H9J4 1324 aaKnown RBP27.79■■■□□ 2.04
NOTCH4-205ENST00000491215 G2E3Q7L622 706 aa27.79■■■□□ 2.04
NOTCH4-205ENST00000491215 MRPL50Q8N5N7 158 aaKnown RBP27.79■■■□□ 2.04
NOTCH4-205ENST00000491215 SRP68Q9UHB9 627 aaKnown RBP27.79■■■□□ 2.04
NOTCH4-205ENST00000491215 NARFQ9UHQ1 456 aa27.79■■■□□ 2.04
NOTCH4-205ENST00000491215 FLIIQ13045 1269 aa27.78■■■□□ 2.04
NOTCH4-205ENST00000491215 USPL1Q5W0Q7 1092 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms