RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 HINFPQ9BQA5 517 aa8.53□□□□□ -1.04
PHC3-212ENST00000490723 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
PHC3-212ENST00000490723 C1orf115Q9H7X2 142 aa8.53□□□□□ -1.04
PHC3-212ENST00000490723 H7C1W4 665 aa8.52□□□□□ -1.05
PHC3-212ENST00000490723 FOXK2Q01167 660 aa8.52□□□□□ -1.05
PHC3-212ENST00000490723 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.05
PHC3-212ENST00000490723 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
PHC3-212ENST00000490723 M0R2N6 131 aa8.51□□□□□ -1.05
PHC3-212ENST00000490723 CSB-PGBD3P0DP91 1061 aa8.51□□□□□ -1.05
PHC3-212ENST00000490723 ZNF295-AS1Q8N0V1 137 aa8.51□□□□□ -1.05
PHC3-212ENST00000490723 PGBD3Q8N328 593 aa8.51□□□□□ -1.05
PHC3-212ENST00000490723 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
PHC3-212ENST00000490723 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
PHC3-212ENST00000490723 GPR25O00155 361 aa8.5□□□□□ -1.05
PHC3-212ENST00000490723 WIPF1O43516 503 aa8.5□□□□□ -1.05
PHC3-212ENST00000490723 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
PHC3-212ENST00000490723 ZDHHC1Q8WTX9 485 aa8.5□□□□□ -1.05
PHC3-212ENST00000490723 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
PHC3-212ENST00000490723 GTPBP3Q969Y2 492 aaKnown RBP8.5□□□□□ -1.05
PHC3-212ENST00000490723 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
PHC3-212ENST00000490723 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
PHC3-212ENST00000490723 NOS2P35228 1153 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 GMCL1Q96IK5 515 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
PHC3-212ENST00000490723 NOVA2Q9UNW9 492 aaKnown RBP8.49□□□□□ -1.05
PHC3-212ENST00000490723 PPP1R12BO60237 982 aaPredicted RBP8.48□□□□□ -1.05
PHC3-212ENST00000490723 ATP4AP20648 1035 aa8.48□□□□□ -1.05
PHC3-212ENST00000490723 TEAD4Q15561 434 aa8.48□□□□□ -1.05
PHC3-212ENST00000490723 ARSJQ5FYB0 599 aaPredicted RBP8.48□□□□□ -1.05
PHC3-212ENST00000490723 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
PHC3-212ENST00000490723 SH3PXD2AQ5TCZ1 1133 aa8.48□□□□□ -1.05
PHC3-212ENST00000490723 CHMP7Q8WUX9 453 aaPredicted RBP8.48□□□□□ -1.05
PHC3-212ENST00000490723 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
PHC3-212ENST00000490723 ARXQ96QS3 562 aa8.48□□□□□ -1.05
PHC3-212ENST00000490723 SERTM1A2A2V5 107 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 THBS1P07996 1170 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
PHC3-212ENST00000490723 TXLNAP40222 546 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 PSMA6P60900 246 aaKnown RBP8.47□□□□□ -1.05
PHC3-212ENST00000490723 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
PHC3-212ENST00000490723 KRT76Q01546 638 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 CHMP3Q9Y3E7 222 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
PHC3-212ENST00000490723 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 C1orf216Q8TAB5 229 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 TRERF1Q96PN7 1200 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
PHC3-212ENST00000490723 EML1O00423 815 aa8.45□□□□□ -1.06
PHC3-212ENST00000490723 C21orf2O43822 256 aa8.45□□□□□ -1.06
PHC3-212ENST00000490723 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
PHC3-212ENST00000490723 ZMIZ1Q9ULJ6 1067 aa8.45□□□□□ -1.06
PHC3-212ENST00000490723 A0A1W2PNR3 127 aa8.44□□□□□ -1.06
PHC3-212ENST00000490723 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
PHC3-212ENST00000490723 GAS6Q14393 721 aa8.44□□□□□ -1.06
PHC3-212ENST00000490723 GJA3Q9Y6H8 435 aa8.44□□□□□ -1.06
PHC3-212ENST00000490723 ATG7O95352 703 aa8.43□□□□□ -1.06
PHC3-212ENST00000490723 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
PHC3-212ENST00000490723 STK32AQ8WU08 396 aa8.43□□□□□ -1.06
PHC3-212ENST00000490723 ZIC5Q96T25 663 aa8.43□□□□□ -1.06
PHC3-212ENST00000490723 ARID3AQ99856 593 aa8.43□□□□□ -1.06
PHC3-212ENST00000490723 ELOAQ14241 798 aaKnown RBP8.42□□□□□ -1.06
PHC3-212ENST00000490723 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
PHC3-212ENST00000490723 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
PHC3-212ENST00000490723 UBAP2LQ14157 1087 aaKnown RBP8.41□□□□□ -1.06
PHC3-212ENST00000490723 NLRP8Q86W28 1048 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 ZSCAN1Q8NBB4 408 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 ABHD17AQ96GS6 310 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
PHC3-212ENST00000490723 ZCCHC2Q9C0B9 1178 aaKnown RBP8.41□□□□□ -1.06
PHC3-212ENST00000490723 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 PHF24Q9UPV7 400 aa8.41□□□□□ -1.06
PHC3-212ENST00000490723 ACIN1Q9UKV3 1341 aaKnown RBP8.4□□□□□ -1.06
PHC3-212ENST00000490723 MX2P20592 715 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 IGFBP4P22692 258 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 FIGNL1Q6PIW4 674 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 LRRC69Q6ZNQ3 347 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 MBIPQ9NS73 344 aa8.4□□□□□ -1.06
PHC3-212ENST00000490723 DCDC2BA2VCK2 349 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 ATXN7O15265 892 aaPredicted RBP8.39□□□□□ -1.07
PHC3-212ENST00000490723 BNIP3LO60238 219 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 PRMT3O60678 531 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 HIRAP54198 1017 aaPredicted RBP8.39□□□□□ -1.07
PHC3-212ENST00000490723 ALDH16A1Q8IZ83 802 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
PHC3-212ENST00000490723 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
PHC3-212ENST00000490723 WEE1P30291 646 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms