RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 ATP6V1AP38606 617 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 PDIA6Q15084 440 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 MCM10Q7L590 875 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 GYS1P13807 737 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 CHL1O00533 1208 aa12.27□□□□□ -0.44
SUPT20H-220ENST00000490716 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.44
SUPT20H-220ENST00000490716 FLAD1Q8NFF5 587 aa12.27□□□□□ -0.44
SUPT20H-220ENST00000490716 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 PRAMEF22A3QJZ6 481 aa12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 RUNDC1Q96C34 613 aa12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
SUPT20H-220ENST00000490716 COL15A1P39059 1388 aa12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 COL4A1P02462 1669 aa12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 DNAJC10Q8IXB1 793 aa12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 NBPF15Q8N660 670 aa12.26□□□□□ -0.45
SUPT20H-220ENST00000490716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
SUPT20H-220ENST00000490716 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
SUPT20H-220ENST00000490716 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
SUPT20H-220ENST00000490716 KCNA3P22001 575 aa12.24□□□□□ -0.45
SUPT20H-220ENST00000490716 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
SUPT20H-220ENST00000490716 ATP10DQ9P241 1426 aa12.24□□□□□ -0.45
SUPT20H-220ENST00000490716 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
SUPT20H-220ENST00000490716 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
SUPT20H-220ENST00000490716 TIAM2Q8IVF5 1701 aa12.23□□□□□ -0.45
SUPT20H-220ENST00000490716 CCDC88AQ3V6T2 1871 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 MYH3P11055 1940 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 ADCY9O60503 1353 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 DDR1Q08345 913 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 SYT17Q9BSW7 474 aa12.22□□□□□ -0.45
SUPT20H-220ENST00000490716 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
SUPT20H-220ENST00000490716 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
SUPT20H-220ENST00000490716 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.45
SUPT20H-220ENST00000490716 SLX4Q8IY92 1834 aa12.21□□□□□ -0.45
SUPT20H-220ENST00000490716 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.46
SUPT20H-220ENST00000490716 GNPATO15228 680 aa12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 CD2APQ9Y5K6 639 aa12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
SUPT20H-220ENST00000490716 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 ARXQ96QS3 562 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 IL16Q14005 1332 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 RIPK4P57078 832 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 AK7Q96M32 723 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
SUPT20H-220ENST00000490716 FKBP8Q14318 412 aa12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 NLGN2Q8NFZ4 835 aa12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 PSME4Q14997 1843 aa12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 HOXB7P09629 217 aa12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
SUPT20H-220ENST00000490716 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 TAF1P21675 1872 aa12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
SUPT20H-220ENST00000490716 A1BGP04217 495 aa12.16□□□□□ -0.46
SUPT20H-220ENST00000490716 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
SUPT20H-220ENST00000490716 TEFQ10587 303 aa12.16□□□□□ -0.46
SUPT20H-220ENST00000490716 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
SUPT20H-220ENST00000490716 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
SUPT20H-220ENST00000490716 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
SUPT20H-220ENST00000490716 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.468e-7■□□□□ 10.4
SUPT20H-220ENST00000490716 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.47
SUPT20H-220ENST00000490716 APAF1O14727 1248 aa12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 NFIXQ14938 502 aa12.14□□□□□ -0.47
SUPT20H-220ENST00000490716 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
SUPT20H-220ENST00000490716 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
SUPT20H-220ENST00000490716 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
SUPT20H-220ENST00000490716 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
SUPT20H-220ENST00000490716 STARD3NLO95772 234 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 UBN2Q6ZU65 1347 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 PHF14O94880 888 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms