RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SNRPBP14678 240 aaKnown RBP9.08□□□□□ -0.96
HMGB1P38-201ENST00000490557 NBPF1Q3BBV0 1214 aa9.08□□□□□ -0.96
HMGB1P38-201ENST00000490557 C4orf17Q53FE4 359 aa9.08□□□□□ -0.96
HMGB1P38-201ENST00000490557 WDR44Q5JSH3 913 aa9.08□□□□□ -0.96
HMGB1P38-201ENST00000490557 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P38-201ENST00000490557 PARP3Q9Y6F1 533 aa9.07□□□□□ -0.96
HMGB1P38-201ENST00000490557 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
HMGB1P38-201ENST00000490557 FOXO3O43524 673 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 WEE1P30291 646 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 NOS2P35228 1153 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 TEAD4Q15561 434 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 ZNF787Q6DD87 383 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P38-201ENST00000490557 TATP17735 454 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P38-201ENST00000490557 PTSQ03393 145 aa9.05□□□□□ -0.96
HMGB1P38-201ENST00000490557 GAS2L1Q99501 681 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P38-201ENST00000490557 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
HMGB1P38-201ENST00000490557 POTECB2RU33 542 aa9.04□□□□□ -0.96
HMGB1P38-201ENST00000490557 C21orf2O43822 256 aa9.04□□□□□ -0.96
HMGB1P38-201ENST00000490557 OCLNQ16625 522 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 PGBD3Q8N328 593 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 C2orf49Q9BVC5 232 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
HMGB1P38-201ENST00000490557 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 ZDHHC1Q8WTX9 485 aa9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 HCN4Q9Y3Q4 1203 aa9.02□□□□□ -0.97
HMGB1P38-201ENST00000490557 EML1O00423 815 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 SSFA2P28290 1259 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 FKBP5Q13451 457 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 ARSJQ5FYB0 599 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 TRAIPQ9BWF2 469 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 ZDHHC3Q9NYG2 299 aa9.01□□□□□ -0.97
HMGB1P38-201ENST00000490557 F11P03951 625 aa9□□□□□ -0.97
HMGB1P38-201ENST00000490557 HIRAP54198 1017 aaPredicted RBP9□□□□□ -0.97
HMGB1P38-201ENST00000490557 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
HMGB1P38-201ENST00000490557 SLAIN2Q9P270 581 aa9□□□□□ -0.97
HMGB1P38-201ENST00000490557 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
HMGB1P38-201ENST00000490557 BRD1O95696 1058 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 MSX1P28360 303 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 TXLNAP40222 546 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 ALDH16A1Q8IZ83 802 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
HMGB1P38-201ENST00000490557 SENP3-EIF4A1A0A087X0R7 540 aa8.98□□□□□ -0.97
HMGB1P38-201ENST00000490557 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
HMGB1P38-201ENST00000490557 C1orf53Q5VUE5 145 aa8.98□□□□□ -0.97
HMGB1P38-201ENST00000490557 H7C1W4 665 aa8.97□□□□□ -0.97
HMGB1P38-201ENST00000490557 NAA30Q147X3 362 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P38-201ENST00000490557 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
HMGB1P38-201ENST00000490557 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
HMGB1P38-201ENST00000490557 RUBCNLQ9H714 662 aa8.97□□□□□ -0.97
HMGB1P38-201ENST00000490557 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P38-201ENST00000490557 HIF1AQ16665 826 aa8.96□□□□□ -0.98
HMGB1P38-201ENST00000490557 RTN1Q16799 776 aa8.96□□□□□ -0.98
HMGB1P38-201ENST00000490557 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.98
HMGB1P38-201ENST00000490557 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 ATP4AP20648 1035 aa8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 ITGA6P23229 1130 aa8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 GPC6Q9Y625 555 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P38-201ENST00000490557 CDC14CA4D256 554 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 PPFIA3O75145 1194 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 C16orf46Q6P387 395 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 FOXR1Q6PIV2 292 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 KCTD17Q8N5Z5 321 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
HMGB1P38-201ENST00000490557 A0A1W2PNR3 127 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 ABL1P00519 1130 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 SCNN1AP37088 669 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 LBRQ14739 615 aaKnown RBP8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 GMCL1Q96IK5 515 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 CRISPLD1Q9H336 500 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 QTRT2Q9H974 415 aaKnown RBP8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 SEPT3Q9UH03 358 aa8.93□□□□□ -0.98
HMGB1P38-201ENST00000490557 VEGFBP49765 207 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 KCNA1Q09470 495 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 DGKZQ13574 1117 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 LRRC69Q6ZNQ3 347 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 CAPN12Q6ZSI9 719 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 ZIC5Q96T25 663 aa8.92□□□□□ -0.98
HMGB1P38-201ENST00000490557 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms