RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 CEP170BQ9Y4F5 1589 aaPredicted RBP7.1□□□□□ -1.27
IFRD1-215ENST00000489994 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.1□□□□□ -1.27
IFRD1-215ENST00000489994 TRIM32Q13049 653 aa7.1□□□□□ -1.27
IFRD1-215ENST00000489994 TCOF1Q13428 1488 aaKnown RBP7.09□□□□□ -1.27
IFRD1-215ENST00000489994 SAMD9LQ8IVG5 1584 aa7.09□□□□□ -1.27
IFRD1-215ENST00000489994 EEA1Q15075 1411 aa7.09□□□□□ -1.27
IFRD1-215ENST00000489994 CTHP32929 405 aa7.09□□□□□ -1.27
IFRD1-215ENST00000489994 KCNH2Q12809 1159 aa7.09□□□□□ -1.27
IFRD1-215ENST00000489994 TSHZ1Q6ZSZ6 1077 aa7.09□□□□□ -1.27
IFRD1-215ENST00000489994 NOL8Q76FK4 1167 aaKnown RBP7.09□□□□□ -1.27
IFRD1-215ENST00000489994 PLA2R1Q13018 1463 aa7.09□□□□□ -1.28
IFRD1-215ENST00000489994 GFRA3O60609 400 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 RINLQ6ZS11 566 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 ESF1Q9H501 851 aaKnown RBP7.08□□□□□ -1.28
IFRD1-215ENST00000489994 PDZRN3Q9UPQ7 1066 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 ARHGAP35Q9NRY4 1499 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 FMN1Q68DA7 1419 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 ALKQ9UM73 1620 aa7.08□□□□□ -1.28
IFRD1-215ENST00000489994 HSPA1LP34931 641 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 UNC93B1Q9H1C4 597 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 SH3BP1Q9Y3L3 701 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 ZMYM3Q14202 1370 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 DNMT1P26358 1616 aaKnown RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 CFAP65Q6ZU64 1925 aaKnown RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 STRCP1A6NGW2 1772 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 PLXNC1O60486 1568 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 NEURL4Q96JN8 1562 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 ANP32AP39687 249 aaKnown RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 RGS3P49796 1198 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 CFAP70Q5T0N1 1121 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
IFRD1-215ENST00000489994 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 TMEM51Q9NW97 253 aa7.07□□□□□ -1.28
IFRD1-215ENST00000489994 CLIP1P30622 1438 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PTPRKQ15262 1439 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 INO80Q9ULG1 1556 aaPredicted RBP7.06□□□□□ -1.28
IFRD1-215ENST00000489994 NRG2O14511 850 aaPredicted RBP7.06□□□□□ -1.28
IFRD1-215ENST00000489994 HSP90AA1P07900 732 aaKnown RBP7.06□□□□□ -1.28
IFRD1-215ENST00000489994 WNT7BP56706 349 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PRR20EP86478 221 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PRR20CP86479 221 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PRR20DP86480 221 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PRR20BP86481 221 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PRR20AP86496 221 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PPP1R12CQ9BZL4 782 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 SLC52A1Q9NWF4 448 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
IFRD1-215ENST00000489994 PER1O15534 1290 aaPredicted RBP7.05□□□□□ -1.28
IFRD1-215ENST00000489994 FOXC1Q12948 553 aa7.05□□□□□ -1.28
IFRD1-215ENST00000489994 EGFL6Q8IUX8 553 aa7.05□□□□□ -1.28
IFRD1-215ENST00000489994 FAM43AQ8N2R8 423 aa7.05□□□□□ -1.28
IFRD1-215ENST00000489994 CARD10Q9BWT7 1032 aa7.05□□□□□ -1.28
IFRD1-215ENST00000489994 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 GDF9O60383 454 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
IFRD1-215ENST00000489994 CTDSPL2Q05D32 466 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 VAC14Q08AM6 782 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 WNT7AO00755 349 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 LMOD1P29536 600 aaPredicted RBP7.04□□□□□ -1.28
IFRD1-215ENST00000489994 TRIM67Q6ZTA4 783 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 ANKRD13AQ8IZ07 590 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 VWDEQ8N2E2 1590 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
IFRD1-215ENST00000489994 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.28
IFRD1-215ENST00000489994 TERF2IPQ9NYB0 399 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
IFRD1-215ENST00000489994 A2ML1A8K2U0 1454 aa7.03□□□□□ -1.28
IFRD1-215ENST00000489994 XIRP1Q702N8 1843 aaKnown RBP7.03□□□□□ -1.28
IFRD1-215ENST00000489994 CPS1P31327 1500 aa7.03□□□□□ -1.28
IFRD1-215ENST00000489994 PALM3A6NDB9 673 aaPredicted RBP7.03□□□□□ -1.28
IFRD1-215ENST00000489994 TNFRSF10AO00220 468 aa7.03□□□□□ -1.28
IFRD1-215ENST00000489994 PKD2L1Q9P0L9 805 aa7.03□□□□□ -1.28
IFRD1-215ENST00000489994 SHANK2Q9UPX8 1470 aa7.03□□□□□ -1.28
IFRD1-215ENST00000489994 TCERG1O14776 1098 aaKnown RBP7.02□□□□□ -1.29
IFRD1-215ENST00000489994 NRDCO43847 1150 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 PIP4K2BP78356 416 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 SRPK2P78362 688 aaKnown RBP7.02□□□□□ -1.29
IFRD1-215ENST00000489994 MYBPC2Q14324 1141 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 NBPF9Q3BBW0 867 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 CDCA8Q53HL2 280 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 BAP1Q92560 729 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 HMX1Q9NP08 348 aaPredicted RBP7.02□□□□□ -1.29
IFRD1-215ENST00000489994 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 A2MP01023 1474 aa7.02□□□□□ -1.29
IFRD1-215ENST00000489994 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 CCDC96Q2M329 555 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 HSP90AB3PQ58FF7 597 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
IFRD1-215ENST00000489994 CYP4X1Q8N118 509 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 OTUD6BQ8N6M0 293 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms