RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
TRAIP-210ENST00000489948 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
TRAIP-210ENST00000489948 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
TRAIP-210ENST00000489948 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
TRAIP-210ENST00000489948 STARD3NLO95772 234 aa17.12■□□□□ 0.33
TRAIP-210ENST00000489948 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
TRAIP-210ENST00000489948 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
TRAIP-210ENST00000489948 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
TRAIP-210ENST00000489948 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
TRAIP-210ENST00000489948 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAIP-210ENST00000489948 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAIP-210ENST00000489948 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
TRAIP-210ENST00000489948 BCAR3O75815 825 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
TRAIP-210ENST00000489948 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
TRAIP-210ENST00000489948 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 PTPRCP08575 1304 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 PXDNLA1KZ92 1463 aa17.11■□□□□ 0.33
TRAIP-210ENST00000489948 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
TRAIP-210ENST00000489948 ITPK1Q13572 414 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 PDIA6Q15084 440 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
TRAIP-210ENST00000489948 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
TRAIP-210ENST00000489948 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
TRAIP-210ENST00000489948 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.33
TRAIP-210ENST00000489948 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
TRAIP-210ENST00000489948 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
TRAIP-210ENST00000489948 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
TRAIP-210ENST00000489948 APBA3O96018 575 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 FLIIQ13045 1269 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
TRAIP-210ENST00000489948 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 LINC00116Q8NCU8 138 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
TRAIP-210ENST00000489948 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
TRAIP-210ENST00000489948 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
TRAIP-210ENST00000489948 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
TRAIP-210ENST00000489948 C4AP0C0L4 1744 aa17.05■□□□□ 0.32
TRAIP-210ENST00000489948 IL6STP40189 918 aaPredicted RBP17.05■□□□□ 0.32
TRAIP-210ENST00000489948 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
TRAIP-210ENST00000489948 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
TRAIP-210ENST00000489948 INTS5Q6P9B9 1019 aaKnown RBP17.05■□□□□ 0.32
TRAIP-210ENST00000489948 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
TRAIP-210ENST00000489948 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
TRAIP-210ENST00000489948 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
TRAIP-210ENST00000489948 ABCC4O15439 1325 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
TRAIP-210ENST00000489948 A1BGP04217 495 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 MS4A1P11836 297 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 TRIM27P14373 513 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 G2E3Q7L622 706 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
TRAIP-210ENST00000489948 LRRC4BQ9NT99 713 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 TUBGCP6Q96RT7 1819 aa17.04■□□□□ 0.32
TRAIP-210ENST00000489948 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
TRAIP-210ENST00000489948 ANKRD36CQ5JPF3 1778 aa17.03■□□□□ 0.32
TRAIP-210ENST00000489948 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
TRAIP-210ENST00000489948 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
TRAIP-210ENST00000489948 ANXA1P04083 346 aa17.02■□□□□ 0.32
TRAIP-210ENST00000489948 BAG6P46379 1132 aa17.02■□□□□ 0.32
TRAIP-210ENST00000489948 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
TRAIP-210ENST00000489948 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.32
TRAIP-210ENST00000489948 PROM2Q8N271 834 aa17.02■□□□□ 0.32
TRAIP-210ENST00000489948 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
TRAIP-210ENST00000489948 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
TRAIP-210ENST00000489948 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
TRAIP-210ENST00000489948 ADCY9O60503 1353 aa17.02■□□□□ 0.31
TRAIP-210ENST00000489948 COL15A1P39059 1388 aa17.02■□□□□ 0.31
TRAIP-210ENST00000489948 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
TRAIP-210ENST00000489948 MYL6BP14649 208 aa17.01■□□□□ 0.31
TRAIP-210ENST00000489948 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
TRAIP-210ENST00000489948 RGL2O15211 777 aa17■□□□□ 0.31
TRAIP-210ENST00000489948 PLIN1O60240 522 aa17■□□□□ 0.31
TRAIP-210ENST00000489948 XAGE3Q8WTP9 111 aa17■□□□□ 0.31
TRAIP-210ENST00000489948 NUP98P52948 1817 aa16.99■□□□□ 0.31
TRAIP-210ENST00000489948 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
TRAIP-210ENST00000489948 PIP4K2AP48426 406 aaPredicted RBP16.99■□□□□ 0.31
TRAIP-210ENST00000489948 KCNQ4P56696 695 aa16.99■□□□□ 0.31
TRAIP-210ENST00000489948 COPS6Q7L5N1 327 aa16.99■□□□□ 0.31
TRAIP-210ENST00000489948 FTSJ3Q8IY81 847 aaKnown RBP16.99■□□□□ 0.31
TRAIP-210ENST00000489948 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
TRAIP-210ENST00000489948 ADRA2BP18089 450 aa16.98■□□□□ 0.31
TRAIP-210ENST00000489948 KSR2Q6VAB6 950 aa16.98■□□□□ 0.31
TRAIP-210ENST00000489948 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
TRAIP-210ENST00000489948 AK7Q96M32 723 aa16.98■□□□□ 0.31
TRAIP-210ENST00000489948 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms