RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 THBS1P07996 1170 aa10.39□□□□□ -0.75
CCDC39-206ENST00000489868 NPAS3Q8IXF0 933 aa10.39□□□□□ -0.75
CCDC39-206ENST00000489868 GAS2L1Q99501 681 aaPredicted RBP10.39□□□□□ -0.75
CCDC39-206ENST00000489868 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
CCDC39-206ENST00000489868 CABP1Q9NZU7 370 aa10.39□□□□□ -0.75
CCDC39-206ENST00000489868 ATP4AP20648 1035 aa10.38□□□□□ -0.75
CCDC39-206ENST00000489868 GPAMQ9HCL2 828 aa10.38□□□□□ -0.75
CCDC39-206ENST00000489868 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
CCDC39-206ENST00000489868 MSX1P28360 303 aa10.37□□□□□ -0.75
CCDC39-206ENST00000489868 TEAD4Q15561 434 aa10.37□□□□□ -0.75
CCDC39-206ENST00000489868 POTEAQ6S8J7 498 aa10.37□□□□□ -0.75
CCDC39-206ENST00000489868 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
CCDC39-206ENST00000489868 SCG3Q8WXD2 468 aaKnown RBP10.37□□□□□ -0.75
CCDC39-206ENST00000489868 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
CCDC39-206ENST00000489868 ACIN1Q9UKV3 1341 aaKnown RBP10.36□□□□□ -0.75
CCDC39-206ENST00000489868 A0A1B0GTH6 734 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 EML1O00423 815 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 PPP1R15AO75807 674 aaPredicted RBP10.36□□□□□ -0.75
CCDC39-206ENST00000489868 NOS2P35228 1153 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 TXLNAP40222 546 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 DBN1Q16643 649 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 KLRG1Q96E93 195 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 ATAD2Q6PL18 1390 aa10.36□□□□□ -0.75
CCDC39-206ENST00000489868 WFS1O76024 890 aa10.35□□□□□ -0.75
CCDC39-206ENST00000489868 F11P03951 625 aa10.35□□□□□ -0.75
CCDC39-206ENST00000489868 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
CCDC39-206ENST00000489868 WEE1P30291 646 aa10.35□□□□□ -0.75
CCDC39-206ENST00000489868 RIPOR1Q6ZS17 1223 aa10.35□□□□□ -0.75
CCDC39-206ENST00000489868 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
CCDC39-206ENST00000489868 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
CCDC39-206ENST00000489868 PPP1R12BO60237 982 aaPredicted RBP10.34□□□□□ -0.75
CCDC39-206ENST00000489868 PSMA6P60900 246 aaKnown RBP10.34□□□□□ -0.75
CCDC39-206ENST00000489868 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
CCDC39-206ENST00000489868 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
CCDC39-206ENST00000489868 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
CCDC39-206ENST00000489868 ZNF837Q96EG3 531 aaPredicted RBP10.34□□□□□ -0.75
CCDC39-206ENST00000489868 RUBCNLQ9H714 662 aa10.34□□□□□ -0.75
CCDC39-206ENST00000489868 TMEM88BA6NKF7 163 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 OCLNQ16625 522 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 C7orf43Q8WVR3 580 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 C2orf49Q9BVC5 232 aaPredicted RBP10.33□□□□□ -0.76
CCDC39-206ENST00000489868 ZNF232Q9UNY5 417 aa10.33□□□□□ -0.76
CCDC39-206ENST00000489868 SERTM1A2A2V5 107 aa10.32□□□□□ -0.76
CCDC39-206ENST00000489868 CDC14CA4D256 554 aa10.32□□□□□ -0.76
CCDC39-206ENST00000489868 PRMT3O60678 531 aa10.32□□□□□ -0.76
CCDC39-206ENST00000489868 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
CCDC39-206ENST00000489868 SWI5Q1ZZU3 235 aa10.32□□□□□ -0.76
CCDC39-206ENST00000489868 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
CCDC39-206ENST00000489868 IGFBP4P22692 258 aa10.31□□□□□ -0.76
CCDC39-206ENST00000489868 HIRAP54198 1017 aaPredicted RBP10.31□□□□□ -0.76
CCDC39-206ENST00000489868 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
CCDC39-206ENST00000489868 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
CCDC39-206ENST00000489868 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
CCDC39-206ENST00000489868 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
CCDC39-206ENST00000489868 IRF7Q92985 503 aa10.3□□□□□ -0.76
CCDC39-206ENST00000489868 CRISPLD1Q9H336 500 aa10.3□□□□□ -0.76
CCDC39-206ENST00000489868 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
CCDC39-206ENST00000489868 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
CCDC39-206ENST00000489868 CLP1Q92989 425 aaKnown RBP10.29□□□□□ -0.76
CCDC39-206ENST00000489868 NUCKS1Q9H1E3 243 aaKnown RBP10.29□□□□□ -0.76
CCDC39-206ENST00000489868 GPR25O00155 361 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 GMPRP36959 345 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 KRT76Q01546 638 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 C1orf216Q8TAB5 229 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 ZIC5Q96T25 663 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 PHACTR1Q9C0D0 580 aa10.28□□□□□ -0.76
CCDC39-206ENST00000489868 SV2AQ7L0J3 742 aa10.27□□□□□ -0.77
CCDC39-206ENST00000489868 GTPBP3Q969Y2 492 aaKnown RBP10.27□□□□□ -0.77
CCDC39-206ENST00000489868 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 GAS6Q14393 721 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 CAPN12Q6ZSI9 719 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 ALDH16A1Q8IZ83 802 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 HCN2Q9UL51 889 aa10.26□□□□□ -0.77
CCDC39-206ENST00000489868 H7C1W4 665 aa10.25□□□□□ -0.77
CCDC39-206ENST00000489868 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
CCDC39-206ENST00000489868 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
CCDC39-206ENST00000489868 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
CCDC39-206ENST00000489868 PGBD3Q8N328 593 aa10.25□□□□□ -0.77
CCDC39-206ENST00000489868 NGLY1Q96IV0 654 aa10.25□□□□□ -0.77
CCDC39-206ENST00000489868 CXXC1Q9P0U4 656 aaPredicted RBP10.25□□□□□ -0.77
CCDC39-206ENST00000489868 FOXO3O43524 673 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 SCNN1AP37088 669 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 C1orf53Q5VUE5 145 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 RETREG2Q8NC44 543 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 GMCL1Q96IK5 515 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
CCDC39-206ENST00000489868 BICDL1Q6ZP65 573 aa10.23□□□□□ -0.77
CCDC39-206ENST00000489868 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
CCDC39-206ENST00000489868 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
CCDC39-206ENST00000489868 QTRT2Q9H974 415 aaKnown RBP10.23□□□□□ -0.77
CCDC39-206ENST00000489868 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
CCDC39-206ENST00000489868 ATP2B4P23634 1241 aa10.22□□□□□ -0.77
CCDC39-206ENST00000489868 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
CCDC39-206ENST00000489868 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
CCDC39-206ENST00000489868 HSH2DQ96JZ2 352 aa10.22□□□□□ -0.77
CCDC39-206ENST00000489868 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
CCDC39-206ENST00000489868 ZCCHC2Q9C0B9 1178 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms