RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
EPHB4-207ENST00000489808 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
EPHB4-207ENST00000489808 CCDC184Q52MB2 194 aa25.19■■□□□ 1.62
EPHB4-207ENST00000489808 SRP68Q9UHB9 627 aaKnown RBP25.19■■□□□ 1.62
EPHB4-207ENST00000489808 RRP7AQ9Y3A4 280 aaKnown RBP25.19■■□□□ 1.62
EPHB4-207ENST00000489808 CICQ96RK0 1608 aaPredicted RBP25.19■■□□□ 1.62
EPHB4-207ENST00000489808 DCAF8L1A6NGE4 600 aa25.18■■□□□ 1.62
EPHB4-207ENST00000489808 MMP10P09238 476 aa25.18■■□□□ 1.62
EPHB4-207ENST00000489808 SNRPA1P09661 255 aaKnown RBP25.18■■□□□ 1.62
EPHB4-207ENST00000489808 NEUROD2Q15784 382 aa25.18■■□□□ 1.62
EPHB4-207ENST00000489808 USP16Q9Y5T5 823 aa25.18■■□□□ 1.62
EPHB4-207ENST00000489808 SIPA1L3O60292 1781 aaPredicted RBP25.18■■□□□ 1.62
EPHB4-207ENST00000489808 USP42Q9H9J4 1324 aaKnown RBP25.17■■□□□ 1.62
EPHB4-207ENST00000489808 LMOD3Q0VAK6 560 aa25.17■■□□□ 1.62
EPHB4-207ENST00000489808 CD2APQ9Y5K6 639 aa25.17■■□□□ 1.62
EPHB4-207ENST00000489808 PRAMEF22A3QJZ6 481 aa25.16■■□□□ 1.62
EPHB4-207ENST00000489808 ZPR1O75312 459 aa25.16■■□□□ 1.62
EPHB4-207ENST00000489808 A1BGP04217 495 aa25.16■■□□□ 1.62
EPHB4-207ENST00000489808 EIF5P55010 431 aaKnown RBP25.16■■□□□ 1.62
EPHB4-207ENST00000489808 FKBP8Q14318 412 aa25.15■■□□□ 1.62
EPHB4-207ENST00000489808 NLGN2Q8NFZ4 835 aa25.15■■□□□ 1.62
EPHB4-207ENST00000489808 UBR2Q8IWV8 1755 aa25.15■■□□□ 1.62
EPHB4-207ENST00000489808 NARFQ9UHQ1 456 aa25.14■■□□□ 1.62
EPHB4-207ENST00000489808 EIF4A1P60842 406 aaKnown RBP25.13■■□□□ 1.61
EPHB4-207ENST00000489808 USPL1Q5W0Q7 1092 aa25.13■■□□□ 1.61
EPHB4-207ENST00000489808 TRIM35Q9UPQ4 493 aa25.13■■□□□ 1.61
EPHB4-207ENST00000489808 A0A087WZG4 1122 aa25.12■■□□□ 1.61
EPHB4-207ENST00000489808 IL6STP40189 918 aaPredicted RBP25.12■■□□□ 1.61
EPHB4-207ENST00000489808 COL15A1P39059 1388 aa25.12■■□□□ 1.61
EPHB4-207ENST00000489808 BABAM1Q9NWV8 329 aa25.11■■□□□ 1.61
EPHB4-207ENST00000489808 GIGYF1O75420 1035 aaPredicted RBP25.1■■□□□ 1.61
EPHB4-207ENST00000489808 TM4SF1P30408 202 aa25.1■■□□□ 1.61
EPHB4-207ENST00000489808 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
EPHB4-207ENST00000489808 APAF1O14727 1248 aa25.09■■□□□ 1.61
EPHB4-207ENST00000489808 BCL2L12Q9HB09 334 aa25.09■■□□□ 1.61
EPHB4-207ENST00000489808 TSPYL4Q9UJ04 414 aa25.09■■□□□ 1.61
EPHB4-207ENST00000489808 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
EPHB4-207ENST00000489808 DLG5Q8TDM6 1919 aa25.08■■□□□ 1.6
EPHB4-207ENST00000489808 NPM2Q86SE8 214 aaKnown RBP25.07■■□□□ 1.6
EPHB4-207ENST00000489808 TBC1D2BQ9UPU7 963 aa25.07■■□□□ 1.6
EPHB4-207ENST00000489808 ZNF330Q9Y3S2 320 aaPredicted RBP25.07■■□□□ 1.6
EPHB4-207ENST00000489808 PIP4K2AP48426 406 aaPredicted RBP25.06■■□□□ 1.6
EPHB4-207ENST00000489808 DDR1Q08345 913 aa25.06■■□□□ 1.6
EPHB4-207ENST00000489808 GPR162Q16538 588 aa25.06■■□□□ 1.6
EPHB4-207ENST00000489808 NBPF26B4DH59 902 aa25.05■■□□□ 1.6
EPHB4-207ENST00000489808 CHL1O00533 1208 aa25.05■■□□□ 1.6
EPHB4-207ENST00000489808 NBPF10Q6P3W6 841 aaKnown RBP25.05■■□□□ 1.6
EPHB4-207ENST00000489808 NBPF15Q8N660 670 aa25.05■■□□□ 1.6
EPHB4-207ENST00000489808 NFIXQ14938 502 aa25.04■■□□□ 1.6
EPHB4-207ENST00000489808 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
EPHB4-207ENST00000489808 TGFB2P61812 414 aa25.02■■□□□ 1.6
EPHB4-207ENST00000489808 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
EPHB4-207ENST00000489808 LAS1LQ9Y4W2 734 aaKnown RBP25.02■■□□□ 1.6
EPHB4-207ENST00000489808 CAMTA2O94983 1202 aa25.01■■□□□ 1.59
EPHB4-207ENST00000489808 DZIP3Q86Y13 1208 aaKnown RBP25.01■■□□□ 1.59
EPHB4-207ENST00000489808 C4AP0C0L4 1744 aa25■■□□□ 1.59
EPHB4-207ENST00000489808 CFAP44Q96MT7 982 aa24.99■■□□□ 1.59
EPHB4-207ENST00000489808 TBC1D9BQ66K14 1250 aa24.98■■□□□ 1.59
EPHB4-207ENST00000489808 BICDL1Q6ZP65 573 aa24.98■■□□□ 1.59
EPHB4-207ENST00000489808 UTRNP46939 3433 aa24.98■■□□□ 1.59
EPHB4-207ENST00000489808 SERPINB2P05120 415 aa24.97■■□□□ 1.59
EPHB4-207ENST00000489808 YBX3P16989 372 aaKnown RBP eCLIP24.97■■□□□ 1.596e-7■□□□□ 10.4
EPHB4-207ENST00000489808 C10orf71Q711Q0 1435 aa24.96■■□□□ 1.59
EPHB4-207ENST00000489808 KDM3BQ7LBC6 1761 aa24.96■■□□□ 1.59
EPHB4-207ENST00000489808 A0A0G2JLW4 131 aa24.96■■□□□ 1.59
EPHB4-207ENST00000489808 ZNF853P0CG23 659 aa24.96■■□□□ 1.59
EPHB4-207ENST00000489808 GRIN3BO60391 1043 aa24.95■■□□□ 1.58
EPHB4-207ENST00000489808 EIF2S2P20042 333 aaKnown RBP24.95■■□□□ 1.58
EPHB4-207ENST00000489808 CALD1Q05682 793 aaKnown RBP24.95■■□□□ 1.58
EPHB4-207ENST00000489808 CLEC4GQ6UXB4 293 aa24.95■■□□□ 1.58
EPHB4-207ENST00000489808 DPEP1P16444 411 aa24.94■■□□□ 1.58
EPHB4-207ENST00000489808 NGEFQ8N5V2 710 aa24.94■■□□□ 1.58
EPHB4-207ENST00000489808 RGL2O15211 777 aa24.93■■□□□ 1.58
EPHB4-207ENST00000489808 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
EPHB4-207ENST00000489808 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
EPHB4-207ENST00000489808 IFT57Q9NWB7 429 aa24.93■■□□□ 1.58
EPHB4-207ENST00000489808 WWC3Q9ULE0 1092 aa24.93■■□□□ 1.58
EPHB4-207ENST00000489808 GOLGB1Q14789 3259 aaKnown RBP24.92■■□□□ 1.58
EPHB4-207ENST00000489808 ERBB4Q15303 1308 aa24.92■■□□□ 1.58
EPHB4-207ENST00000489808 MYL6BP14649 208 aa24.92■■□□□ 1.58
EPHB4-207ENST00000489808 YY1P25490 414 aa24.92■■□□□ 1.58
EPHB4-207ENST00000489808 CCDC27Q2M243 656 aa24.92■■□□□ 1.58
EPHB4-207ENST00000489808 NCBP3Q53F19 620 aaKnown RBP24.92■■□□□ 1.58
EPHB4-207ENST00000489808 MBIPQ9NS73 344 aa24.92■■□□□ 1.58
EPHB4-207ENST00000489808 SENP3-EIF4A1A0A087X0R7 540 aa24.91■■□□□ 1.58
EPHB4-207ENST00000489808 KCNA3P22001 575 aa24.91■■□□□ 1.58
EPHB4-207ENST00000489808 GNAI1P63096 354 aa24.91■■□□□ 1.58
EPHB4-207ENST00000489808 PDIA6Q15084 440 aa24.91■■□□□ 1.58
EPHB4-207ENST00000489808 ZNF652Q9Y2D9 606 aa24.91■■□□□ 1.58
EPHB4-207ENST00000489808 PXDNLA1KZ92 1463 aa24.9■■□□□ 1.58
EPHB4-207ENST00000489808 ERVV-1B6SEH8 477 aa24.89■■□□□ 1.58
EPHB4-207ENST00000489808 HLFQ16534 295 aa24.89■■□□□ 1.58
EPHB4-207ENST00000489808 TTLL7Q6ZT98 887 aa24.89■■□□□ 1.58
EPHB4-207ENST00000489808 WWC1Q8IX03 1113 aa24.89■■□□□ 1.58
EPHB4-207ENST00000489808 FAM9BQ8IZU0 186 aa24.89■■□□□ 1.58
EPHB4-207ENST00000489808 LRP10Q7Z4F1 713 aa24.88■■□□□ 1.57
EPHB4-207ENST00000489808 NECTIN2Q92692 538 aa24.88■■□□□ 1.57
EPHB4-207ENST00000489808 HOXB7P09629 217 aa24.87■■□□□ 1.57
EPHB4-207ENST00000489808 CHRNA5P30532 468 aa24.87■■□□□ 1.57
EPHB4-207ENST00000489808 CARMIL3Q8ND23 1372 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms