RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 FANCIQ9NVI1 1328 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 NUP188Q5SRE5 1749 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 A0A087WZG4 1122 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
FDPS-214ENST00000489324 GNPATO15228 680 aa12.62□□□□□ -0.39
FDPS-214ENST00000489324 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
FDPS-214ENST00000489324 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
FDPS-214ENST00000489324 DUSP27Q5VZP5 1158 aa12.62□□□□□ -0.39
FDPS-214ENST00000489324 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
FDPS-214ENST00000489324 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
FDPS-214ENST00000489324 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
FDPS-214ENST00000489324 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
FDPS-214ENST00000489324 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
FDPS-214ENST00000489324 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
FDPS-214ENST00000489324 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
FDPS-214ENST00000489324 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
FDPS-214ENST00000489324 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 RGL2O15211 777 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
FDPS-214ENST00000489324 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
FDPS-214ENST00000489324 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
FDPS-214ENST00000489324 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
FDPS-214ENST00000489324 ZBTB1Q9Y2K1 713 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
FDPS-214ENST00000489324 TJP1Q07157 1748 aa12.59□□□□□ -0.39
FDPS-214ENST00000489324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
FDPS-214ENST00000489324 A1BGP04217 495 aa12.59□□□□□ -0.39
FDPS-214ENST00000489324 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
FDPS-214ENST00000489324 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
FDPS-214ENST00000489324 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
FDPS-214ENST00000489324 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
FDPS-214ENST00000489324 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
FDPS-214ENST00000489324 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
FDPS-214ENST00000489324 VAMP4O75379 141 aa12.58□□□□□ -0.4
FDPS-214ENST00000489324 RFC4P35249 363 aa12.58□□□□□ -0.4
FDPS-214ENST00000489324 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
FDPS-214ENST00000489324 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
FDPS-214ENST00000489324 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
FDPS-214ENST00000489324 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
FDPS-214ENST00000489324 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
FDPS-214ENST00000489324 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
FDPS-214ENST00000489324 NBPF15Q8N660 670 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
FDPS-214ENST00000489324 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 HYPKQ9NX55 129 aa12.57□□□□□ -0.4
FDPS-214ENST00000489324 COL15A1P39059 1388 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
FDPS-214ENST00000489324 ZPR1O75312 459 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 PHF14O94880 888 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 QSER1Q2KHR3 1735 aa12.56□□□□□ -0.4
FDPS-214ENST00000489324 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
FDPS-214ENST00000489324 MSH5O43196 834 aa12.55□□□□□ -0.4
FDPS-214ENST00000489324 PDIA6Q15084 440 aa12.55□□□□□ -0.4
FDPS-214ENST00000489324 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
FDPS-214ENST00000489324 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
FDPS-214ENST00000489324 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
FDPS-214ENST00000489324 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
FDPS-214ENST00000489324 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 KIF6Q6ZMV9 814 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
FDPS-214ENST00000489324 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
FDPS-214ENST00000489324 MYL6BP14649 208 aa12.53□□□□□ -0.4
FDPS-214ENST00000489324 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
FDPS-214ENST00000489324 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
FDPS-214ENST00000489324 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
FDPS-214ENST00000489324 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.4
FDPS-214ENST00000489324 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
FDPS-214ENST00000489324 GYS1P13807 737 aa12.52□□□□□ -0.41
FDPS-214ENST00000489324 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
FDPS-214ENST00000489324 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
FDPS-214ENST00000489324 CAMTA2O94983 1202 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 POLD1P28340 1107 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
FDPS-214ENST00000489324 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 ARXQ96QS3 562 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 MAP3K15Q6ZN16 1313 aa12.51□□□□□ -0.41
FDPS-214ENST00000489324 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
FDPS-214ENST00000489324 ANKRD13DQ6ZTN6 518 aa12.5□□□□□ -0.41
FDPS-214ENST00000489324 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
FDPS-214ENST00000489324 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
FDPS-214ENST00000489324 CASZ1Q86V15 1759 aa12.49□□□□□ -0.41
FDPS-214ENST00000489324 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms