RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
SMKR1-202ENST00000488846 RPS6KA4O75676 772 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
SMKR1-202ENST00000488846 KCNA4P22459 653 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 AK7Q96M32 723 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 STARD3NLO95772 234 aa11.59□□□□□ -0.55
SMKR1-202ENST00000488846 COL23A1Q86Y22 540 aaPredicted RBP11.59□□□□□ -0.55
SMKR1-202ENST00000488846 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
SMKR1-202ENST00000488846 CCDC87Q9NVE4 849 aa11.59□□□□□ -0.55
SMKR1-202ENST00000488846 LRP5O75197 1615 aa11.58□□□□□ -0.56
SMKR1-202ENST00000488846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
SMKR1-202ENST00000488846 GNPATO15228 680 aa11.58□□□□□ -0.56
SMKR1-202ENST00000488846 GNAI1P63096 354 aa11.58□□□□□ -0.56
SMKR1-202ENST00000488846 WDR63Q8IWG1 891 aa11.58□□□□□ -0.56
SMKR1-202ENST00000488846 RTCBQ9Y3I0 505 aaKnown RBP11.58□□□□□ -0.56
SMKR1-202ENST00000488846 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
SMKR1-202ENST00000488846 SOS1Q07889 1333 aaPredicted RBP11.58□□□□□ -0.56
SMKR1-202ENST00000488846 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 EIF5P55010 431 aaKnown RBP11.57□□□□□ -0.56
SMKR1-202ENST00000488846 SGIP1Q9BQI5 828 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 MTFR1LQ9H019 292 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
SMKR1-202ENST00000488846 HOXB7P09629 217 aa11.56□□□□□ -0.56
SMKR1-202ENST00000488846 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
SMKR1-202ENST00000488846 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
SMKR1-202ENST00000488846 A1BGP04217 495 aa11.55□□□□□ -0.56
SMKR1-202ENST00000488846 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
SMKR1-202ENST00000488846 PTGER2P43116 358 aa11.55□□□□□ -0.56
SMKR1-202ENST00000488846 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
SMKR1-202ENST00000488846 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
SMKR1-202ENST00000488846 ERBB4Q15303 1308 aa11.55□□□□□ -0.56
SMKR1-202ENST00000488846 COL15A1P39059 1388 aa11.54□□□□□ -0.56
SMKR1-202ENST00000488846 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
SMKR1-202ENST00000488846 PHF14O94880 888 aa11.54□□□□□ -0.56
SMKR1-202ENST00000488846 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
SMKR1-202ENST00000488846 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
SMKR1-202ENST00000488846 SPON1Q9HCB6 807 aa11.54□□□□□ -0.56
SMKR1-202ENST00000488846 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
SMKR1-202ENST00000488846 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
SMKR1-202ENST00000488846 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
SMKR1-202ENST00000488846 RGL2O15211 777 aa11.53□□□□□ -0.56
SMKR1-202ENST00000488846 ZBTB7AO95365 584 aa11.53□□□□□ -0.56
SMKR1-202ENST00000488846 KRT24Q2M2I5 525 aa11.53□□□□□ -0.56
SMKR1-202ENST00000488846 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
SMKR1-202ENST00000488846 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
SMKR1-202ENST00000488846 GYS1P13807 737 aa11.52□□□□□ -0.57
SMKR1-202ENST00000488846 RFC4P35249 363 aa11.52□□□□□ -0.57
SMKR1-202ENST00000488846 PDIA6Q15084 440 aa11.52□□□□□ -0.57
SMKR1-202ENST00000488846 NARFQ9UHQ1 456 aa11.52□□□□□ -0.57
SMKR1-202ENST00000488846 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
SMKR1-202ENST00000488846 A0A087WZG4 1122 aa11.51□□□□□ -0.57
SMKR1-202ENST00000488846 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
SMKR1-202ENST00000488846 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
SMKR1-202ENST00000488846 C8orf58Q8NAV2 365 aa11.51□□□□□ -0.57
SMKR1-202ENST00000488846 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
SMKR1-202ENST00000488846 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
SMKR1-202ENST00000488846 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
SMKR1-202ENST00000488846 SCN7AQ01118 1682 aa11.5□□□□□ -0.57
SMKR1-202ENST00000488846 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
SMKR1-202ENST00000488846 NLGN1Q8N2Q7 840 aa11.5□□□□□ -0.57
SMKR1-202ENST00000488846 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
SMKR1-202ENST00000488846 BCORQ6W2J9 1755 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 TM4SF1P30408 202 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
SMKR1-202ENST00000488846 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 TSPYL6Q8N831 410 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 CHMP4AQ9BY43 222 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
SMKR1-202ENST00000488846 SRP68Q9UHB9 627 aaKnown RBP11.49□□□□□ -0.57
SMKR1-202ENST00000488846 E9PSI1 815 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 ZPR1O75312 459 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 EIF2S2P20042 333 aaKnown RBP11.48□□□□□ -0.57
SMKR1-202ENST00000488846 SLFN5Q08AF3 891 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 FKBP8Q14318 412 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 USPL1Q5W0Q7 1092 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
SMKR1-202ENST00000488846 DDX21Q9NR30 783 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMKR1-202ENST00000488846 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
SMKR1-202ENST00000488846 POLD1P28340 1107 aa11.47□□□□□ -0.57
SMKR1-202ENST00000488846 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
SMKR1-202ENST00000488846 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
SMKR1-202ENST00000488846 ARXQ96QS3 562 aa11.47□□□□□ -0.57
SMKR1-202ENST00000488846 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
SMKR1-202ENST00000488846 TBC1D2BQ9UPU7 963 aa11.47□□□□□ -0.57
SMKR1-202ENST00000488846 VAMP4O75379 141 aa11.46□□□□□ -0.57
SMKR1-202ENST00000488846 EXOSC9Q06265 439 aaKnown RBP11.46□□□□□ -0.57
SMKR1-202ENST00000488846 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
SMKR1-202ENST00000488846 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
SMKR1-202ENST00000488846 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.58
SMKR1-202ENST00000488846 MAP3K15Q6ZN16 1313 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 POLRMTO00411 1230 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms