RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
PHF1-210ENST00000488767 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
PHF1-210ENST00000488767 A0A087WZG4 1122 aa16.86■□□□□ 0.29
PHF1-210ENST00000488767 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
PHF1-210ENST00000488767 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
PHF1-210ENST00000488767 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
PHF1-210ENST00000488767 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
PHF1-210ENST00000488767 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
PHF1-210ENST00000488767 APAF1O14727 1248 aa16.85■□□□□ 0.29
PHF1-210ENST00000488767 KCNQ3O43525 872 aa16.85■□□□□ 0.29
PHF1-210ENST00000488767 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
PHF1-210ENST00000488767 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
PHF1-210ENST00000488767 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
PHF1-210ENST00000488767 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
PHF1-210ENST00000488767 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
PHF1-210ENST00000488767 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
PHF1-210ENST00000488767 ZNF330Q9Y3S2 320 aaPredicted RBP16.84■□□□□ 0.29
PHF1-210ENST00000488767 LAS1LQ9Y4W2 734 aaKnown RBP16.84■□□□□ 0.29
PHF1-210ENST00000488767 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
PHF1-210ENST00000488767 COL15A1P39059 1388 aa16.84■□□□□ 0.29
PHF1-210ENST00000488767 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
PHF1-210ENST00000488767 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
PHF1-210ENST00000488767 GYS1P13807 737 aa16.81■□□□□ 0.28
PHF1-210ENST00000488767 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
PHF1-210ENST00000488767 MMP10P09238 476 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 EIF4A1P60842 406 aaKnown RBP16.8■□□□□ 0.28
PHF1-210ENST00000488767 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 PARP3Q9Y6F1 533 aa16.8■□□□□ 0.28
PHF1-210ENST00000488767 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
PHF1-210ENST00000488767 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
PHF1-210ENST00000488767 COL24A1Q17RW2 1714 aa16.79■□□□□ 0.28
PHF1-210ENST00000488767 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
PHF1-210ENST00000488767 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
PHF1-210ENST00000488767 A1BGP04217 495 aa16.79■□□□□ 0.28
PHF1-210ENST00000488767 EIF5P55010 431 aaKnown RBP16.79■□□□□ 0.28
PHF1-210ENST00000488767 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
PHF1-210ENST00000488767 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
PHF1-210ENST00000488767 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
PHF1-210ENST00000488767 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
PHF1-210ENST00000488767 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 CHL1O00533 1208 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 GNAI1P63096 354 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
PHF1-210ENST00000488767 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
PHF1-210ENST00000488767 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
PHF1-210ENST00000488767 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
PHF1-210ENST00000488767 FKBP8Q14318 412 aa16.75■□□□□ 0.27
PHF1-210ENST00000488767 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
PHF1-210ENST00000488767 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
PHF1-210ENST00000488767 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
PHF1-210ENST00000488767 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
PHF1-210ENST00000488767 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
PHF1-210ENST00000488767 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
PHF1-210ENST00000488767 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
PHF1-210ENST00000488767 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
PHF1-210ENST00000488767 NPHP1O15259 732 aa16.72■□□□□ 0.27
PHF1-210ENST00000488767 HOXB7P09629 217 aa16.72■□□□□ 0.27
PHF1-210ENST00000488767 MYL6BP14649 208 aa16.72■□□□□ 0.27
PHF1-210ENST00000488767 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
PHF1-210ENST00000488767 GPR162Q16538 588 aa16.71■□□□□ 0.27
PHF1-210ENST00000488767 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
PHF1-210ENST00000488767 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
PHF1-210ENST00000488767 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.27
PHF1-210ENST00000488767 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 RGL2O15211 777 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 TM4SF1P30408 202 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 NFIXQ14938 502 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
PHF1-210ENST00000488767 BICDL1Q6ZP65 573 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
PHF1-210ENST00000488767 IL16Q14005 1332 aa16.7■□□□□ 0.26
PHF1-210ENST00000488767 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
PHF1-210ENST00000488767 CAMTA2O94983 1202 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 TGFB2P61812 414 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 HDGFL1Q5TGJ6 251 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
PHF1-210ENST00000488767 DDR1Q08345 913 aa16.68■□□□□ 0.26
PHF1-210ENST00000488767 WDR63Q8IWG1 891 aa16.68■□□□□ 0.26
PHF1-210ENST00000488767 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
PHF1-210ENST00000488767 C10orf71Q711Q0 1435 aa16.68■□□□□ 0.26
PHF1-210ENST00000488767 SERPINB2P05120 415 aa16.67■□□□□ 0.26
PHF1-210ENST00000488767 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
PHF1-210ENST00000488767 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
PHF1-210ENST00000488767 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
PHF1-210ENST00000488767 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
PHF1-210ENST00000488767 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
PHF1-210ENST00000488767 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
PHF1-210ENST00000488767 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
PHF1-210ENST00000488767 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms