RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 MYH16Q9H6N6 1097 aa22.16■■□□□ 1.14
CDK5RAP1-214ENST00000488723 CCDC87Q9NVE4 849 aa22.16■■□□□ 1.14
CDK5RAP1-214ENST00000488723 MYH14Q7Z406 1995 aaKnown RBP22.16■■□□□ 1.14
CDK5RAP1-214ENST00000488723 GOLGA2Q08379 1002 aa22.15■■□□□ 1.14
CDK5RAP1-214ENST00000488723 INTS5Q6P9B9 1019 aaKnown RBP22.15■■□□□ 1.14
CDK5RAP1-214ENST00000488723 RTCBQ9Y3I0 505 aaKnown RBP22.15■■□□□ 1.14
CDK5RAP1-214ENST00000488723 USP16Q9Y5T5 823 aa22.15■■□□□ 1.14
CDK5RAP1-214ENST00000488723 R3HDM1Q15032 1099 aaKnown RBP22.14■■□□□ 1.13
CDK5RAP1-214ENST00000488723 ERBB4Q15303 1308 aa22.13■■□□□ 1.13
CDK5RAP1-214ENST00000488723 GNPATO15228 680 aa22.13■■□□□ 1.13
CDK5RAP1-214ENST00000488723 SLC16A10Q8TF71 515 aa22.13■■□□□ 1.13
CDK5RAP1-214ENST00000488723 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
CDK5RAP1-214ENST00000488723 E9PSI1 815 aa22.12■■□□□ 1.13
CDK5RAP1-214ENST00000488723 TRAPPC3LQ5T215 181 aa22.12■■□□□ 1.13
CDK5RAP1-214ENST00000488723 PNPLA7Q6ZV29 1317 aa22.11■■□□□ 1.13
CDK5RAP1-214ENST00000488723 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
CDK5RAP1-214ENST00000488723 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
CDK5RAP1-214ENST00000488723 PRAMEF22A3QJZ6 481 aa22.1■■□□□ 1.13
CDK5RAP1-214ENST00000488723 DUSP27Q5VZP5 1158 aa22.1■■□□□ 1.13
CDK5RAP1-214ENST00000488723 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 ZBTB1Q9Y2K1 713 aa22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 LAMB4A4D0S4 1761 aa22.09■■□□□ 1.13
CDK5RAP1-214ENST00000488723 A0A087WZG4 1122 aa22.08■■□□□ 1.13
CDK5RAP1-214ENST00000488723 PSDA5PKW4 1024 aaPredicted RBP22.08■■□□□ 1.13
CDK5RAP1-214ENST00000488723 A1BGP04217 495 aa22.08■■□□□ 1.13
CDK5RAP1-214ENST00000488723 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.13
CDK5RAP1-214ENST00000488723 TRMT2AQ8IZ69 625 aaKnown RBP22.08■■□□□ 1.13
CDK5RAP1-214ENST00000488723 NPM2Q86SE8 214 aaKnown RBP22.07■■□□□ 1.12
CDK5RAP1-214ENST00000488723 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
CDK5RAP1-214ENST00000488723 TUBGCP6Q96RT7 1819 aa22.07■■□□□ 1.12
CDK5RAP1-214ENST00000488723 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
CDK5RAP1-214ENST00000488723 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
CDK5RAP1-214ENST00000488723 ARHGEF1Q92888 912 aaKnown RBP22.06■■□□□ 1.12
CDK5RAP1-214ENST00000488723 RFC4P35249 363 aa22.05■■□□□ 1.12
CDK5RAP1-214ENST00000488723 KRT24Q2M2I5 525 aa22.05■■□□□ 1.12
CDK5RAP1-214ENST00000488723 AMIGO3Q86WK7 504 aa22.05■■□□□ 1.12
CDK5RAP1-214ENST00000488723 NBPF26B4DH59 902 aa22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 RGL2O15211 777 aa22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 EIF2S2P20042 333 aaKnown RBP22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 HDGFL1Q5TGJ6 251 aa22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 NBPF10Q6P3W6 841 aaKnown RBP22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 NBPF15Q8N660 670 aa22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 CASZ1Q86V15 1759 aa22.04■■□□□ 1.12
CDK5RAP1-214ENST00000488723 COL15A1P39059 1388 aa22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 PHF14O94880 888 aa22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 TWISTNBQ3B726 338 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 MTFR1LQ9H019 292 aa22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 DBF4Q9UBU7 674 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP1-214ENST00000488723 EXOSC9Q06265 439 aaKnown RBP22.02■■□□□ 1.12
CDK5RAP1-214ENST00000488723 CCDC30Q5VVM6 783 aa22.02■■□□□ 1.12
CDK5RAP1-214ENST00000488723 TSPYL6Q8N831 410 aa22.02■■□□□ 1.12
CDK5RAP1-214ENST00000488723 NARFQ9UHQ1 456 aa22.02■■□□□ 1.12
CDK5RAP1-214ENST00000488723 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
CDK5RAP1-214ENST00000488723 MSH5O43196 834 aa22.01■■□□□ 1.11
CDK5RAP1-214ENST00000488723 VAMP4O75379 141 aa22.01■■□□□ 1.11
CDK5RAP1-214ENST00000488723 PDIA6Q15084 440 aa22.01■■□□□ 1.11
CDK5RAP1-214ENST00000488723 PDGFDQ9GZP0 370 aaPredicted RBP22.01■■□□□ 1.11
CDK5RAP1-214ENST00000488723 ZPR1O75312 459 aa22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 CT47B1P0C2W7 299 aaPredicted RBP22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 NLGN1Q8N2Q7 840 aa22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 ZNF428Q96B54 188 aa22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 CDCA7LQ96GN5 454 aa22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 HYPKQ9NX55 129 aa22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 USP42Q9H9J4 1324 aaKnown RBP22■■□□□ 1.11
CDK5RAP1-214ENST00000488723 LRP10Q7Z4F1 713 aa21.99■■□□□ 1.11
CDK5RAP1-214ENST00000488723 SPON1Q9HCB6 807 aa21.99■■□□□ 1.11
CDK5RAP1-214ENST00000488723 CACNA1FO60840 1977 aa21.99■■□□□ 1.11
CDK5RAP1-214ENST00000488723 CLEC4GQ6UXB4 293 aa21.97■■□□□ 1.11
CDK5RAP1-214ENST00000488723 SMIM5Q71RC9 77 aa21.97■■□□□ 1.11
CDK5RAP1-214ENST00000488723 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 GYS1P13807 737 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 MYL6BP14649 208 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 STK31Q9BXU1 1019 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 CHPF2Q9P2E5 772 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 C4AP0C0L4 1744 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 COL24A1Q17RW2 1714 aa21.96■■□□□ 1.11
CDK5RAP1-214ENST00000488723 ZBTB7AO95365 584 aa21.95■■□□□ 1.1
CDK5RAP1-214ENST00000488723 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
CDK5RAP1-214ENST00000488723 NECTIN2Q92692 538 aa21.95■■□□□ 1.1
CDK5RAP1-214ENST00000488723 ZNF330Q9Y3S2 320 aaPredicted RBP21.95■■□□□ 1.1
CDK5RAP1-214ENST00000488723 USPL1Q5W0Q7 1092 aa21.94■■□□□ 1.1
CDK5RAP1-214ENST00000488723 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
CDK5RAP1-214ENST00000488723 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
CDK5RAP1-214ENST00000488723 POLD1P28340 1107 aa21.93■■□□□ 1.1
CDK5RAP1-214ENST00000488723 PROSER3Q2NL68 480 aa21.93■■□□□ 1.1
CDK5RAP1-214ENST00000488723 KIF6Q6ZMV9 814 aa21.93■■□□□ 1.1
CDK5RAP1-214ENST00000488723 ZNF652Q9Y2D9 606 aa21.93■■□□□ 1.1
CDK5RAP1-214ENST00000488723 COPS6Q7L5N1 327 aa21.92■■□□□ 1.1
CDK5RAP1-214ENST00000488723 SGIP1Q9BQI5 828 aa21.92■■□□□ 1.1
CDK5RAP1-214ENST00000488723 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
CDK5RAP1-214ENST00000488723 ATF5Q9Y2D1 282 aaPredicted RBP21.92■■□□□ 1.1
CDK5RAP1-214ENST00000488723 MAP3K15Q6ZN16 1313 aa21.91■■□□□ 1.1
CDK5RAP1-214ENST00000488723 PTGER2P43116 358 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms