RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 BABAM1Q9NWV8 329 aa19.72■□□□□ 0.75
CXCL12-207ENST00000488591 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
CXCL12-207ENST00000488591 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
CXCL12-207ENST00000488591 ARHGEF1Q92888 912 aaKnown RBP19.71■□□□□ 0.75
CXCL12-207ENST00000488591 TSPYL4Q9UJ04 414 aa19.71■□□□□ 0.75
CXCL12-207ENST00000488591 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
CXCL12-207ENST00000488591 ARXQ96QS3 562 aa19.7■□□□□ 0.74
CXCL12-207ENST00000488591 SGIP1Q9BQI5 828 aa19.7■□□□□ 0.74
CXCL12-207ENST00000488591 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
CXCL12-207ENST00000488591 CALD1Q05682 793 aaKnown RBP19.69■□□□□ 0.74
CXCL12-207ENST00000488591 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
CXCL12-207ENST00000488591 KDM3BQ7LBC6 1761 aa19.68■□□□□ 0.74
CXCL12-207ENST00000488591 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
CXCL12-207ENST00000488591 ZBTB1Q9Y2K1 713 aa19.68■□□□□ 0.74
CXCL12-207ENST00000488591 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
CXCL12-207ENST00000488591 USP16Q9Y5T5 823 aa19.68■□□□□ 0.74
CXCL12-207ENST00000488591 SOS1Q07889 1333 aaPredicted RBP19.68■□□□□ 0.74
CXCL12-207ENST00000488591 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
CXCL12-207ENST00000488591 NLGN1Q8N2Q7 840 aa19.67■□□□□ 0.74
CXCL12-207ENST00000488591 COL24A1Q17RW2 1714 aa19.67■□□□□ 0.74
CXCL12-207ENST00000488591 SRCAPQ6ZRS2 3230 aa19.66■□□□□ 0.74
CXCL12-207ENST00000488591 A0A087WZG4 1122 aa19.66■□□□□ 0.74
CXCL12-207ENST00000488591 ZPR1O75312 459 aa19.66■□□□□ 0.74
CXCL12-207ENST00000488591 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
CXCL12-207ENST00000488591 CHL1O00533 1208 aa19.65■□□□□ 0.74
CXCL12-207ENST00000488591 A1BGP04217 495 aa19.65■□□□□ 0.74
CXCL12-207ENST00000488591 COL15A1P39059 1388 aa19.65■□□□□ 0.74
CXCL12-207ENST00000488591 PRAMEF22A3QJZ6 481 aa19.64■□□□□ 0.73
CXCL12-207ENST00000488591 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-207ENST00000488591 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-207ENST00000488591 CFAP44Q96MT7 982 aa19.64■□□□□ 0.73
CXCL12-207ENST00000488591 ZNF330Q9Y3S2 320 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-207ENST00000488591 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
CXCL12-207ENST00000488591 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
CXCL12-207ENST00000488591 GYS1P13807 737 aa19.63■□□□□ 0.73
CXCL12-207ENST00000488591 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
CXCL12-207ENST00000488591 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
CXCL12-207ENST00000488591 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
CXCL12-207ENST00000488591 GNAI1P63096 354 aa19.62■□□□□ 0.73
CXCL12-207ENST00000488591 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
CXCL12-207ENST00000488591 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
CXCL12-207ENST00000488591 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
CXCL12-207ENST00000488591 NARFQ9UHQ1 456 aa19.62■□□□□ 0.73
CXCL12-207ENST00000488591 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
CXCL12-207ENST00000488591 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
CXCL12-207ENST00000488591 MMP10P09238 476 aa19.6■□□□□ 0.73
CXCL12-207ENST00000488591 IFT57Q9NWB7 429 aa19.6■□□□□ 0.73
CXCL12-207ENST00000488591 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
CXCL12-207ENST00000488591 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
CXCL12-207ENST00000488591 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
CXCL12-207ENST00000488591 LAMB4A4D0S4 1761 aa19.59■□□□□ 0.73
CXCL12-207ENST00000488591 FKBP8Q14318 412 aa19.58■□□□□ 0.72
CXCL12-207ENST00000488591 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
CXCL12-207ENST00000488591 MBIPQ9NS73 344 aa19.58■□□□□ 0.72
CXCL12-207ENST00000488591 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
CXCL12-207ENST00000488591 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
CXCL12-207ENST00000488591 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
CXCL12-207ENST00000488591 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
CXCL12-207ENST00000488591 TBC1D2BQ9UPU7 963 aa19.57■□□□□ 0.72
CXCL12-207ENST00000488591 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
CXCL12-207ENST00000488591 ERBB4Q15303 1308 aa19.56■□□□□ 0.72
CXCL12-207ENST00000488591 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
CXCL12-207ENST00000488591 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
CXCL12-207ENST00000488591 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
CXCL12-207ENST00000488591 DZIP3Q86Y13 1208 aaKnown RBP19.56■□□□□ 0.72
CXCL12-207ENST00000488591 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
CXCL12-207ENST00000488591 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
CXCL12-207ENST00000488591 HOXB7P09629 217 aa19.54■□□□□ 0.72
CXCL12-207ENST00000488591 IL16Q14005 1332 aa19.53■□□□□ 0.72
CXCL12-207ENST00000488591 MYL6BP14649 208 aa19.53■□□□□ 0.72
CXCL12-207ENST00000488591 TM4SF1P30408 202 aa19.53■□□□□ 0.72
CXCL12-207ENST00000488591 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
CXCL12-207ENST00000488591 MIER1Q8N108 512 aa19.53■□□□□ 0.72
CXCL12-207ENST00000488591 KRT24Q2M2I5 525 aa19.52■□□□□ 0.72
CXCL12-207ENST00000488591 DUSP27Q5VZP5 1158 aa19.52■□□□□ 0.72
CXCL12-207ENST00000488591 BCL2L12Q9HB09 334 aa19.52■□□□□ 0.72
CXCL12-207ENST00000488591 ZNF652Q9Y2D9 606 aa19.52■□□□□ 0.72
CXCL12-207ENST00000488591 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
CXCL12-207ENST00000488591 NFIXQ14938 502 aa19.51■□□□□ 0.71
CXCL12-207ENST00000488591 CLEC4GQ6UXB4 293 aa19.51■□□□□ 0.71
CXCL12-207ENST00000488591 CHMP4AQ9BY43 222 aa19.51■□□□□ 0.71
CXCL12-207ENST00000488591 DDR1Q08345 913 aa19.5■□□□□ 0.71
CXCL12-207ENST00000488591 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
CXCL12-207ENST00000488591 KIF6Q6ZMV9 814 aa19.5■□□□□ 0.71
CXCL12-207ENST00000488591 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
CXCL12-207ENST00000488591 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
CXCL12-207ENST00000488591 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
CXCL12-207ENST00000488591 RGL2O15211 777 aa19.49■□□□□ 0.71
CXCL12-207ENST00000488591 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
CXCL12-207ENST00000488591 TBC1D9BQ66K14 1250 aa19.48■□□□□ 0.71
CXCL12-207ENST00000488591 NLGN2Q8NFZ4 835 aa19.48■□□□□ 0.71
CXCL12-207ENST00000488591 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
CXCL12-207ENST00000488591 SETDB2Q96T68 719 aa19.48■□□□□ 0.71
CXCL12-207ENST00000488591 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
CXCL12-207ENST00000488591 ERVV-1B6SEH8 477 aa19.47■□□□□ 0.71
CXCL12-207ENST00000488591 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-207ENST00000488591 SERPINB2P05120 415 aa19.47■□□□□ 0.71
CXCL12-207ENST00000488591 PDIA6Q15084 440 aa19.47■□□□□ 0.71
CXCL12-207ENST00000488591 DBF4Q9UBU7 674 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-207ENST00000488591 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms