RNA–Protein interactions for RNA: ENST00000488338.2

LAMTOR4-210, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, humanhuman

TSL 3

Gene LAMTOR4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR4-210ENST00000488338 GNPATO15228 680 aa19.15■□□□□ 0.66
LAMTOR4-210ENST00000488338 HOXB7P09629 217 aa19.15■□□□□ 0.66
LAMTOR4-210ENST00000488338 SSFA2P28290 1259 aa19.15■□□□□ 0.66
LAMTOR4-210ENST00000488338 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
LAMTOR4-210ENST00000488338 USP16Q9Y5T5 823 aa19.15■□□□□ 0.66
LAMTOR4-210ENST00000488338 RPS6KA4O75676 772 aa19.14■□□□□ 0.65
LAMTOR4-210ENST00000488338 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.65
LAMTOR4-210ENST00000488338 E9PSI1 815 aa19.13■□□□□ 0.65
LAMTOR4-210ENST00000488338 ADRA2BP18089 450 aa19.13■□□□□ 0.65
LAMTOR4-210ENST00000488338 INTS5Q6P9B9 1019 aaKnown RBP19.13■□□□□ 0.65
LAMTOR4-210ENST00000488338 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
LAMTOR4-210ENST00000488338 PSDA5PKW4 1024 aaPredicted RBP19.12■□□□□ 0.65
LAMTOR4-210ENST00000488338 TRAPPC3LQ5T215 181 aa19.12■□□□□ 0.65
LAMTOR4-210ENST00000488338 PRAMEF22A3QJZ6 481 aa19.11■□□□□ 0.65
LAMTOR4-210ENST00000488338 MSH5O43196 834 aa19.11■□□□□ 0.65
LAMTOR4-210ENST00000488338 CANXP27824 592 aaKnown RBP19.11■□□□□ 0.65
LAMTOR4-210ENST00000488338 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
LAMTOR4-210ENST00000488338 ERBB4Q15303 1308 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 PNPLA7Q6ZV29 1317 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 FANCIQ9NVI1 1328 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 PHF14O94880 888 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 IL6STP40189 918 aaPredicted RBP19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 SLC16A10Q8TF71 515 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 ZBTB1Q9Y2K1 713 aa19.1■□□□□ 0.65
LAMTOR4-210ENST00000488338 A0A087WZG4 1122 aa19.09■□□□□ 0.65
LAMTOR4-210ENST00000488338 A1BGP04217 495 aa19.09■□□□□ 0.65
LAMTOR4-210ENST00000488338 EIF2S2P20042 333 aaKnown RBP19.09■□□□□ 0.65
LAMTOR4-210ENST00000488338 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
LAMTOR4-210ENST00000488338 UBR3Q6ZT12 1888 aa19.08■□□□□ 0.65
LAMTOR4-210ENST00000488338 RFC4P35249 363 aa19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 SLFN5Q08AF3 891 aa19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 KRT24Q2M2I5 525 aa19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 HDGFL1Q5TGJ6 251 aa19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 MYH14Q7Z406 1995 aaKnown RBP19.08■□□□□ 0.64
LAMTOR4-210ENST00000488338 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
LAMTOR4-210ENST00000488338 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
LAMTOR4-210ENST00000488338 COL23A1Q86Y22 540 aaPredicted RBP19.07■□□□□ 0.64
LAMTOR4-210ENST00000488338 C8orf58Q8NAV2 365 aa19.07■□□□□ 0.64
LAMTOR4-210ENST00000488338 EIF5P55010 431 aaKnown RBP19.06■□□□□ 0.64
LAMTOR4-210ENST00000488338 TWISTNBQ3B726 338 aaPredicted RBP19.06■□□□□ 0.64
LAMTOR4-210ENST00000488338 ARHGEF1Q92888 912 aaKnown RBP19.06■□□□□ 0.64
LAMTOR4-210ENST00000488338 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
LAMTOR4-210ENST00000488338 COL15A1P39059 1388 aa19.06■□□□□ 0.64
LAMTOR4-210ENST00000488338 TUBGCP6Q96RT7 1819 aa19.05■□□□□ 0.64
LAMTOR4-210ENST00000488338 ZPR1O75312 459 aa19.05■□□□□ 0.64
LAMTOR4-210ENST00000488338 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
LAMTOR4-210ENST00000488338 CCDC30Q5VVM6 783 aa19.05■□□□□ 0.64
LAMTOR4-210ENST00000488338 DBF4Q9UBU7 674 aaPredicted RBP19.05■□□□□ 0.64
LAMTOR4-210ENST00000488338 MTFR1LQ9H019 292 aa19.04■□□□□ 0.64
LAMTOR4-210ENST00000488338 MYL6BP14649 208 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 AMIGO3Q86WK7 504 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 NECTIN2Q92692 538 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 ARXQ96QS3 562 aa19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 DDX21Q9NR30 783 aaKnown RBP eCLIP19.03■□□□□ 0.64
LAMTOR4-210ENST00000488338 NBPF26B4DH59 902 aa19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 NBPF15Q8N660 670 aa19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
LAMTOR4-210ENST00000488338 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 SMIM5Q71RC9 77 aa19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 DZIP3Q86Y13 1208 aaKnown RBP19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 SPON1Q9HCB6 807 aa19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 CASZ1Q86V15 1759 aa19.01■□□□□ 0.63
LAMTOR4-210ENST00000488338 USP42Q9H9J4 1324 aaKnown RBP19■□□□□ 0.63
LAMTOR4-210ENST00000488338 VAMP4O75379 141 aa19■□□□□ 0.63
LAMTOR4-210ENST00000488338 ZBTB7AO95365 584 aa19■□□□□ 0.63
LAMTOR4-210ENST00000488338 PDIA6Q15084 440 aa19■□□□□ 0.63
LAMTOR4-210ENST00000488338 CHPF2Q9P2E5 772 aa19■□□□□ 0.63
LAMTOR4-210ENST00000488338 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
LAMTOR4-210ENST00000488338 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
LAMTOR4-210ENST00000488338 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
LAMTOR4-210ENST00000488338 TBC1D2BQ9UPU7 963 aa18.99■□□□□ 0.63
LAMTOR4-210ENST00000488338 RGL2O15211 777 aa18.98■□□□□ 0.63
LAMTOR4-210ENST00000488338 POLD1P28340 1107 aa18.98■□□□□ 0.63
LAMTOR4-210ENST00000488338 USPL1Q5W0Q7 1092 aa18.98■□□□□ 0.63
LAMTOR4-210ENST00000488338 ZNF652Q9Y2D9 606 aa18.98■□□□□ 0.63
LAMTOR4-210ENST00000488338 GYS1P13807 737 aa18.97■□□□□ 0.63
LAMTOR4-210ENST00000488338 SRP68Q9UHB9 627 aaKnown RBP18.97■□□□□ 0.63
LAMTOR4-210ENST00000488338 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
LAMTOR4-210ENST00000488338 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
LAMTOR4-210ENST00000488338 ERVV-1B6SEH8 477 aa18.96■□□□□ 0.63
LAMTOR4-210ENST00000488338 PROSER3Q2NL68 480 aa18.96■□□□□ 0.63
LAMTOR4-210ENST00000488338 CLEC4GQ6UXB4 293 aa18.96■□□□□ 0.63
LAMTOR4-210ENST00000488338 CAMTA2O94983 1202 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 ANXA1P04083 346 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 COPS6Q7L5N1 327 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 LRP10Q7Z4F1 713 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 XAGE3Q8WTP9 111 aa18.95■□□□□ 0.62
LAMTOR4-210ENST00000488338 AIMP1Q12904 312 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms