RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
GABBR1-215ENST00000488334 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
GABBR1-215ENST00000488334 GNPATO15228 680 aa18.77■□□□□ 0.6
GABBR1-215ENST00000488334 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
GABBR1-215ENST00000488334 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
GABBR1-215ENST00000488334 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
GABBR1-215ENST00000488334 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
GABBR1-215ENST00000488334 TJP1Q07157 1748 aa18.76■□□□□ 0.59
GABBR1-215ENST00000488334 PNPLA7Q6ZV29 1317 aa18.75■□□□□ 0.59
GABBR1-215ENST00000488334 A0A087WZG4 1122 aa18.75■□□□□ 0.59
GABBR1-215ENST00000488334 IL6STP40189 918 aaPredicted RBP18.75■□□□□ 0.59
GABBR1-215ENST00000488334 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
GABBR1-215ENST00000488334 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
GABBR1-215ENST00000488334 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
GABBR1-215ENST00000488334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
GABBR1-215ENST00000488334 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
GABBR1-215ENST00000488334 E9PSI1 815 aa18.73■□□□□ 0.59
GABBR1-215ENST00000488334 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
GABBR1-215ENST00000488334 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
GABBR1-215ENST00000488334 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
GABBR1-215ENST00000488334 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
GABBR1-215ENST00000488334 RGL2O15211 777 aa18.71■□□□□ 0.59
GABBR1-215ENST00000488334 RFC4P35249 363 aa18.71■□□□□ 0.59
GABBR1-215ENST00000488334 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
GABBR1-215ENST00000488334 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
GABBR1-215ENST00000488334 DUSP27Q5VZP5 1158 aa18.7■□□□□ 0.58
GABBR1-215ENST00000488334 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
GABBR1-215ENST00000488334 MSH5O43196 834 aa18.69■□□□□ 0.58
GABBR1-215ENST00000488334 PHF14O94880 888 aa18.69■□□□□ 0.58
GABBR1-215ENST00000488334 A1BGP04217 495 aa18.69■□□□□ 0.58
GABBR1-215ENST00000488334 CANXP27824 592 aaKnown RBP18.69■□□□□ 0.58
GABBR1-215ENST00000488334 SPON1Q9HCB6 807 aa18.69■□□□□ 0.58
GABBR1-215ENST00000488334 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
GABBR1-215ENST00000488334 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
GABBR1-215ENST00000488334 PRAMEF22A3QJZ6 481 aa18.68■□□□□ 0.58
GABBR1-215ENST00000488334 ZPR1O75312 459 aa18.68■□□□□ 0.58
GABBR1-215ENST00000488334 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
GABBR1-215ENST00000488334 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
GABBR1-215ENST00000488334 COL15A1P39059 1388 aa18.68■□□□□ 0.58
GABBR1-215ENST00000488334 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
GABBR1-215ENST00000488334 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
GABBR1-215ENST00000488334 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
GABBR1-215ENST00000488334 TSR2Q969E8 191 aaKnown RBP18.67■□□□□ 0.58
GABBR1-215ENST00000488334 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
GABBR1-215ENST00000488334 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
GABBR1-215ENST00000488334 CASZ1Q86V15 1759 aa18.67■□□□□ 0.58
GABBR1-215ENST00000488334 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
GABBR1-215ENST00000488334 CCDC30Q5VVM6 783 aa18.66■□□□□ 0.58
GABBR1-215ENST00000488334 DDX21Q9NR30 783 aaKnown RBP eCLIP18.66■□□□□ 0.58
GABBR1-215ENST00000488334 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 POLD1P28340 1107 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
GABBR1-215ENST00000488334 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
GABBR1-215ENST00000488334 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
GABBR1-215ENST00000488334 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
GABBR1-215ENST00000488334 CT47B1P0C2W7 299 aaPredicted RBP18.64■□□□□ 0.57
GABBR1-215ENST00000488334 CLEC4GQ6UXB4 293 aa18.64■□□□□ 0.57
GABBR1-215ENST00000488334 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.57
GABBR1-215ENST00000488334 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
GABBR1-215ENST00000488334 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
GABBR1-215ENST00000488334 ZBTB7AO95365 584 aa18.63■□□□□ 0.57
GABBR1-215ENST00000488334 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
GABBR1-215ENST00000488334 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
GABBR1-215ENST00000488334 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
GABBR1-215ENST00000488334 ERVV-1B6SEH8 477 aa18.62■□□□□ 0.57
GABBR1-215ENST00000488334 GYS1P13807 737 aa18.62■□□□□ 0.57
GABBR1-215ENST00000488334 PDIA6Q15084 440 aa18.62■□□□□ 0.57
GABBR1-215ENST00000488334 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
GABBR1-215ENST00000488334 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
GABBR1-215ENST00000488334 ZNF330Q9Y3S2 320 aaPredicted RBP18.62■□□□□ 0.57
GABBR1-215ENST00000488334 ELL2O00472 640 aaPredicted RBP18.61■□□□□ 0.57
GABBR1-215ENST00000488334 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
GABBR1-215ENST00000488334 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
GABBR1-215ENST00000488334 VAMP4O75379 141 aa18.6■□□□□ 0.57
GABBR1-215ENST00000488334 MYL6BP14649 208 aa18.6■□□□□ 0.57
GABBR1-215ENST00000488334 USPL1Q5W0Q7 1092 aa18.6■□□□□ 0.57
GABBR1-215ENST00000488334 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
GABBR1-215ENST00000488334 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
GABBR1-215ENST00000488334 LRP10Q7Z4F1 713 aa18.59■□□□□ 0.57
GABBR1-215ENST00000488334 ARXQ96QS3 562 aa18.59■□□□□ 0.57
GABBR1-215ENST00000488334 SGIP1Q9BQI5 828 aa18.59■□□□□ 0.57
GABBR1-215ENST00000488334 CHPF2Q9P2E5 772 aa18.59■□□□□ 0.57
GABBR1-215ENST00000488334 TBC1D2BQ9UPU7 963 aa18.59■□□□□ 0.57
GABBR1-215ENST00000488334 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.57
GABBR1-215ENST00000488334 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
GABBR1-215ENST00000488334 PTGER2P43116 358 aa18.58■□□□□ 0.56
GABBR1-215ENST00000488334 SMIM5Q71RC9 77 aa18.58■□□□□ 0.56
GABBR1-215ENST00000488334 LRP5O75197 1615 aa18.57■□□□□ 0.56
GABBR1-215ENST00000488334 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
GABBR1-215ENST00000488334 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
GABBR1-215ENST00000488334 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
GABBR1-215ENST00000488334 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
GABBR1-215ENST00000488334 SRP68Q9UHB9 627 aaKnown RBP18.57■□□□□ 0.56
GABBR1-215ENST00000488334 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
GABBR1-215ENST00000488334 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms