RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 SNRKQ9NRH2 765 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 NDUFB9Q9Y6M9 179 aa6.2□□□□□ -1.42
HFM1-208ENST00000488023 A0A1B0GTH6 734 aa6.19□□□□□ -1.42
HFM1-208ENST00000488023 HYAL3O43820 417 aaPredicted RBP6.19□□□□□ -1.42
HFM1-208ENST00000488023 FLIIQ13045 1269 aa6.19□□□□□ -1.42
HFM1-208ENST00000488023 MTMR14Q8NCE2 650 aa6.19□□□□□ -1.42
HFM1-208ENST00000488023 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
HFM1-208ENST00000488023 HRH3Q9Y5N1 445 aa6.19□□□□□ -1.42
HFM1-208ENST00000488023 PDIA4P13667 645 aaKnown RBP6.18□□□□□ -1.42
HFM1-208ENST00000488023 LBRQ14739 615 aaKnown RBP6.18□□□□□ -1.42
HFM1-208ENST00000488023 RNF135Q8IUD6 432 aa6.18□□□□□ -1.42
HFM1-208ENST00000488023 TRIM11Q96F44 468 aa6.18□□□□□ -1.42
HFM1-208ENST00000488023 XAGE2Q96GT9 111 aa6.18□□□□□ -1.42
HFM1-208ENST00000488023 ZSCAN10Q96SZ4 725 aaPredicted RBP6.18□□□□□ -1.42
HFM1-208ENST00000488023 PRM3Q9NNZ6 103 aa6.18□□□□□ -1.42
HFM1-208ENST00000488023 ZNF330Q9Y3S2 320 aaPredicted RBP6.18□□□□□ -1.42
HFM1-208ENST00000488023 SPATA31C1P0DKV0 1188 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 CTBSQ01459 385 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 FHDC1Q9C0D6 1143 aaPredicted RBP6.17□□□□□ -1.42
HFM1-208ENST00000488023 RUBCNLQ9H714 662 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 ZBTB7CA1YPR0 619 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 MSX1P28360 303 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 C4orf17Q53FE4 359 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 GNASQ5JWF2 1037 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 CHSY3Q70JA7 882 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 PGBD3Q8N328 593 aa6.17□□□□□ -1.42
HFM1-208ENST00000488023 ATXN7L1Q9ULK2 861 aaPredicted RBP6.17□□□□□ -1.42
HFM1-208ENST00000488023 CCDC9Q9Y3X0 531 aaKnown RBP6.17□□□□□ -1.42
HFM1-208ENST00000488023 MCTP1Q6DN14 999 aa6.16□□□□□ -1.42
HFM1-208ENST00000488023 TMEM214Q6NUQ4 689 aaKnown RBP6.16□□□□□ -1.42
HFM1-208ENST00000488023 CDCA7Q9BWT1 371 aaPredicted RBP6.16□□□□□ -1.42
HFM1-208ENST00000488023 PLVAPQ9BX97 442 aa6.16□□□□□ -1.42
HFM1-208ENST00000488023 NEURL1BA8MQ27 555 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 GPR37L1O60883 481 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 MYCP01106 439 aaPredicted RBP6.15□□□□□ -1.42
HFM1-208ENST00000488023 ARAFP10398 606 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 GTF2E1P29083 439 aaPredicted RBP6.15□□□□□ -1.42
HFM1-208ENST00000488023 EFHC2Q5JST6 749 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 CCDC85AQ96PX6 553 aaPredicted RBP6.15□□□□□ -1.42
HFM1-208ENST00000488023 NDFIP2Q9NV92 336 aa6.15□□□□□ -1.42
HFM1-208ENST00000488023 BNIP3LO60238 219 aa6.14□□□□□ -1.43
HFM1-208ENST00000488023 FGFR3P22607 806 aa6.14□□□□□ -1.43
HFM1-208ENST00000488023 CCDC82Q8N4S0 544 aa6.14□□□□□ -1.43
HFM1-208ENST00000488023 CEP126Q9P2H0 1117 aa6.14□□□□□ -1.43
HFM1-208ENST00000488023 A6NJR5 290 aa6.13□□□□□ -1.43
HFM1-208ENST00000488023 YBX3P16989 372 aaKnown RBP eCLIP6.13□□□□□ -1.43
HFM1-208ENST00000488023 ESCO1Q5FWF5 840 aa6.13□□□□□ -1.43
HFM1-208ENST00000488023 POM121Q96HA1 1249 aa6.13□□□□□ -1.43
HFM1-208ENST00000488023 FNBP4Q8N3X1 1017 aaPredicted RBP6.12□□□□□ -1.43
HFM1-208ENST00000488023 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
HFM1-208ENST00000488023 CLUAP1Q96AJ1 413 aa6.12□□□□□ -1.43
HFM1-208ENST00000488023 CRISPLD1Q9H336 500 aa6.12□□□□□ -1.43
HFM1-208ENST00000488023 COG6Q9Y2V7 657 aa6.12□□□□□ -1.43
HFM1-208ENST00000488023 PPARGC1BQ86YN6 1023 aaKnown RBP6.11□□□□□ -1.43
HFM1-208ENST00000488023 TBC1D2BQ9UPU7 963 aa6.11□□□□□ -1.43
HFM1-208ENST00000488023 STAU1O95793 577 aaKnown RBP6.1□□□□□ -1.43
HFM1-208ENST00000488023 TXKP42681 527 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 ETNK1Q9HBU6 452 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 DNAAF2Q9NVR5 837 aaKnown RBP6.1□□□□□ -1.43
HFM1-208ENST00000488023 KLF15Q9UIH9 416 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 APBA3O96018 575 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 TSGA10IPQ3SY00 556 aa6.1□□□□□ -1.43
HFM1-208ENST00000488023 ZCCHC2Q9C0B9 1178 aaKnown RBP6.1□□□□□ -1.43
HFM1-208ENST00000488023 PAX4O43316 350 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 EIF4G2P78344 907 aaKnown RBP eCLIP6.09□□□□□ -1.43
HFM1-208ENST00000488023 USP4Q13107 963 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 TLR1Q15399 786 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 PCDHGC4Q9Y5F7 938 aa6.09□□□□□ -1.43
HFM1-208ENST00000488023 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
HFM1-208ENST00000488023 IRF5Q13568 498 aa6.08□□□□□ -1.44
HFM1-208ENST00000488023 TBC1D9Q6ZT07 1266 aa6.08□□□□□ -1.44
HFM1-208ENST00000488023 FCHSD1Q86WN1 690 aa6.08□□□□□ -1.44
HFM1-208ENST00000488023 PHTF2Q8N3S3 785 aa6.08□□□□□ -1.44
HFM1-208ENST00000488023 COL17A1Q9UMD9 1497 aaPredicted RBP6.08□□□□□ -1.44
HFM1-208ENST00000488023 H2AFB1P0C5Y9 115 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 H2AFB2P0C5Z0 115 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 NLRP8Q86W28 1048 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 GDPD2Q9HCC8 539 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 DOLKQ9UPQ8 538 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 ATXN7O15265 892 aaPredicted RBP6.07□□□□□ -1.44
HFM1-208ENST00000488023 ATP4AP20648 1035 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 ADH6P28332 368 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 PRRT3Q5FWE3 981 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 HCN2Q9UL51 889 aa6.07□□□□□ -1.44
HFM1-208ENST00000488023 ABL2P42684 1182 aa6.06□□□□□ -1.44
HFM1-208ENST00000488023 C1orf216Q8TAB5 229 aa6.06□□□□□ -1.44
HFM1-208ENST00000488023 SPDYE3A6NKU9 549 aa6.05□□□□□ -1.44
HFM1-208ENST00000488023 MAPTP10636 758 aaKnown RBP6.05□□□□□ -1.44
HFM1-208ENST00000488023 TNP2Q05952 138 aa6.05□□□□□ -1.44
HFM1-208ENST00000488023 FAM182BQ5T319 152 aa6.05□□□□□ -1.44
HFM1-208ENST00000488023 ARID1BQ8NFD5 2236 aaPredicted RBP6.05□□□□□ -1.44
HFM1-208ENST00000488023 INHAP05111 366 aa6.04□□□□□ -1.44
HFM1-208ENST00000488023 CD33P20138 364 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms