RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 FOXO3O43524 673 aa10.02□□□□□ -0.81
USP48-209ENST00000487880 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.81
USP48-209ENST00000487880 GTF2E1P29083 439 aaPredicted RBP10.02□□□□□ -0.81
USP48-209ENST00000487880 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
USP48-209ENST00000487880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
USP48-209ENST00000487880 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.81
USP48-209ENST00000487880 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
USP48-209ENST00000487880 PRICKLE2Q7Z3G6 844 aa10.02□□□□□ -0.81
USP48-209ENST00000487880 EML1O00423 815 aa10.01□□□□□ -0.81
USP48-209ENST00000487880 MAN1A2O60476 641 aa10.01□□□□□ -0.81
USP48-209ENST00000487880 BRD1O95696 1058 aa10.01□□□□□ -0.81
USP48-209ENST00000487880 POU4F2Q12837 409 aa10.01□□□□□ -0.81
USP48-209ENST00000487880 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
USP48-209ENST00000487880 CABP1Q9NZU7 370 aa10□□□□□ -0.81
USP48-209ENST00000487880 SERTM1A2A2V5 107 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 NOS2P35228 1153 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 L3MBTL2Q969R5 705 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 COL26A1Q96A83 441 aa9.99□□□□□ -0.81
USP48-209ENST00000487880 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
USP48-209ENST00000487880 POTECB2RU33 542 aa9.98□□□□□ -0.81
USP48-209ENST00000487880 RHOQP17081 205 aa9.98□□□□□ -0.81
USP48-209ENST00000487880 PLA2G4AP47712 749 aa9.98□□□□□ -0.81
USP48-209ENST00000487880 PHKA2P46019 1235 aa9.97□□□□□ -0.81
USP48-209ENST00000487880 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
USP48-209ENST00000487880 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
USP48-209ENST00000487880 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
USP48-209ENST00000487880 ZNF775Q96BV0 537 aaPredicted RBP9.96□□□□□ -0.82
USP48-209ENST00000487880 ZDHHC3Q9NYG2 299 aa9.96□□□□□ -0.82
USP48-209ENST00000487880 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.82
USP48-209ENST00000487880 SCNN1AP37088 669 aa9.95□□□□□ -0.82
USP48-209ENST00000487880 CAPN12Q6ZSI9 719 aa9.95□□□□□ -0.82
USP48-209ENST00000487880 TIMMDC1Q9NPL8 285 aa9.95□□□□□ -0.82
USP48-209ENST00000487880 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
USP48-209ENST00000487880 DYRK1BQ9Y463 629 aa9.95□□□□□ -0.82
USP48-209ENST00000487880 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
USP48-209ENST00000487880 ATP4AP20648 1035 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 TXLNAP40222 546 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 PTSQ03393 145 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 C7orf43Q8WVR3 580 aa9.94□□□□□ -0.82
USP48-209ENST00000487880 SLC35F4A4IF30 521 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 KCNA1Q09470 495 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 TXNDC2Q86VQ3 553 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 MKNK1Q9BUB5 465 aa9.93□□□□□ -0.82
USP48-209ENST00000487880 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
USP48-209ENST00000487880 GNEQ9Y223 722 aaKnown RBP9.93□□□□□ -0.82
USP48-209ENST00000487880 ALDH16A1Q8IZ83 802 aa9.92□□□□□ -0.82
USP48-209ENST00000487880 MYO19Q96H55 970 aa9.92□□□□□ -0.82
USP48-209ENST00000487880 PHACTR1Q9C0D0 580 aa9.92□□□□□ -0.82
USP48-209ENST00000487880 MSX1P28360 303 aa9.91□□□□□ -0.82
USP48-209ENST00000487880 ARID4AP29374 1257 aaPredicted RBP9.91□□□□□ -0.82
USP48-209ENST00000487880 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
USP48-209ENST00000487880 SEPT3Q9UH03 358 aa9.91□□□□□ -0.82
USP48-209ENST00000487880 HCN4Q9Y3Q4 1203 aa9.91□□□□□ -0.82
USP48-209ENST00000487880 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
USP48-209ENST00000487880 RTN1Q16799 776 aa9.9□□□□□ -0.82
USP48-209ENST00000487880 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
USP48-209ENST00000487880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■■■ 28.3
USP48-209ENST00000487880 F11P03951 625 aa9.89□□□□□ -0.83
USP48-209ENST00000487880 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
USP48-209ENST00000487880 CCDC155Q8N6L0 562 aa9.89□□□□□ -0.83
USP48-209ENST00000487880 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
USP48-209ENST00000487880 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
USP48-209ENST00000487880 COX20Q5RI15 118 aa9.88□□□□□ -0.83
USP48-209ENST00000487880 C16orf46Q6P387 395 aa9.88□□□□□ -0.83
USP48-209ENST00000487880 NGLY1Q96IV0 654 aa9.88□□□□□ -0.83
USP48-209ENST00000487880 SAP130Q9H0E3 1048 aa9.88□□□□□ -0.83
USP48-209ENST00000487880 MTMR7Q9Y216 660 aa9.88□□□□□ -0.83
USP48-209ENST00000487880 KLRG1Q96E93 195 aa9.87□□□□□ -0.83
USP48-209ENST00000487880 GPAMQ9HCL2 828 aa9.87□□□□□ -0.83
USP48-209ENST00000487880 LRFN2Q9ULH4 789 aa9.87□□□□□ -0.83
USP48-209ENST00000487880 NAA30Q147X3 362 aaPredicted RBP9.86□□□□□ -0.83
USP48-209ENST00000487880 AEBP1Q8IUX7 1158 aa9.86□□□□□ -0.83
USP48-209ENST00000487880 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
USP48-209ENST00000487880 GTF3C2Q8WUA4 911 aaPredicted RBP9.86□□□□□ -0.83
USP48-209ENST00000487880 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
USP48-209ENST00000487880 EGFL7Q9UHF1 273 aa9.86□□□□□ -0.83
USP48-209ENST00000487880 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
USP48-209ENST00000487880 THBS1P07996 1170 aa9.85□□□□□ -0.83
USP48-209ENST00000487880 SERPINB4P48594 390 aa9.85□□□□□ -0.83
USP48-209ENST00000487880 RHPN1Q8TCX5 695 aa9.85□□□□□ -0.83
USP48-209ENST00000487880 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
USP48-209ENST00000487880 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
USP48-209ENST00000487880 CUEDC1Q9NWM3 386 aaPredicted RBP9.85□□□□□ -0.83
USP48-209ENST00000487880 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
USP48-209ENST00000487880 PPFIA3O75145 1194 aa9.84□□□□□ -0.83
USP48-209ENST00000487880 ITGA6P23229 1130 aa9.84□□□□□ -0.83
USP48-209ENST00000487880 LBRQ14739 615 aaKnown RBP9.84□□□□□ -0.83
USP48-209ENST00000487880 RUBCNLQ9H714 662 aa9.84□□□□□ -0.83
USP48-209ENST00000487880 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
USP48-209ENST00000487880 A0A1W2PNR3 127 aa9.83□□□□□ -0.84
USP48-209ENST00000487880 DGKZQ13574 1117 aa9.83□□□□□ -0.84
USP48-209ENST00000487880 ARSJQ5FYB0 599 aaPredicted RBP9.83□□□□□ -0.84
USP48-209ENST00000487880 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
USP48-209ENST00000487880 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms