RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
SEC22C-215ENST00000487701 AP1G2O75843 785 aa9.52□□□□□ -0.89
SEC22C-215ENST00000487701 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
SEC22C-215ENST00000487701 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
SEC22C-215ENST00000487701 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
SEC22C-215ENST00000487701 CRIPAKQ8N1N5 446 aa9.51□□□□□ -0.89
SEC22C-215ENST00000487701 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
SEC22C-215ENST00000487701 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
SEC22C-215ENST00000487701 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
SEC22C-215ENST00000487701 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
SEC22C-215ENST00000487701 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
SEC22C-215ENST00000487701 PPP1R15AO75807 674 aaPredicted RBP9.5□□□□□ -0.89
SEC22C-215ENST00000487701 AVPP01185 164 aa9.5□□□□□ -0.89
SEC22C-215ENST00000487701 AGERQ15109 404 aa9.5□□□□□ -0.89
SEC22C-215ENST00000487701 ZNF326Q5BKZ1 582 aaKnown RBP9.5□□□□□ -0.89
SEC22C-215ENST00000487701 SLC26A8Q96RN1 970 aa9.5□□□□□ -0.89
SEC22C-215ENST00000487701 J3QL48 77 aa9.49□□□□□ -0.89
SEC22C-215ENST00000487701 ALDH1A1P00352 501 aa9.49□□□□□ -0.89
SEC22C-215ENST00000487701 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.49□□□□□ -0.89
SEC22C-215ENST00000487701 LRRN4Q8WUT4 740 aa9.49□□□□□ -0.89
SEC22C-215ENST00000487701 NKTRP30414 1462 aaKnown RBP9.48□□□□□ -0.89
SEC22C-215ENST00000487701 SMPD1P17405 629 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 RFC5P40937 340 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 TRIM26Q12899 539 aaPredicted RBP9.47□□□□□ -0.89
SEC22C-215ENST00000487701 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 FBXO41Q8TF61 875 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 PTPRUQ92729 1446 aa9.47□□□□□ -0.89
SEC22C-215ENST00000487701 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
SEC22C-215ENST00000487701 DACH1Q9UI36 760 aa9.46□□□□□ -0.9
SEC22C-215ENST00000487701 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
SEC22C-215ENST00000487701 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.9
SEC22C-215ENST00000487701 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.9
SEC22C-215ENST00000487701 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 KCNA6P17658 529 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 VARSP26640 1264 aaKnown RBP9.45□□□□□ -0.9
SEC22C-215ENST00000487701 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 METP08581 1390 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 MYOM2P54296 1465 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 NRXN1Q9ULB1 1477 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 LAMC1P11047 1609 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 NALCNQ8IZF0 1738 aa9.45□□□□□ -0.9
SEC22C-215ENST00000487701 AXIN1O15169 862 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 SIAH2O43255 324 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
SEC22C-215ENST00000487701 CTC1Q2NKJ3 1217 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 BPHLQ86WA6 291 aaPredicted RBP9.44□□□□□ -0.9
SEC22C-215ENST00000487701 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 ADGRF5Q8IZF2 1346 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 PIK3C2GO75747 1445 aa9.44□□□□□ -0.9
SEC22C-215ENST00000487701 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.44□□□□□ -0.9
SEC22C-215ENST00000487701 TMEM94Q12767 1356 aa9.43□□□□□ -0.9
SEC22C-215ENST00000487701 DHX57Q6P158 1386 aaKnown RBP9.43□□□□□ -0.9
SEC22C-215ENST00000487701 NR6A1Q15406 480 aa9.43□□□□□ -0.9
SEC22C-215ENST00000487701 MAGEB6P1A0A0J9YX57 407 aa9.42□□□□□ -0.9
SEC22C-215ENST00000487701 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
SEC22C-215ENST00000487701 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
SEC22C-215ENST00000487701 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
SEC22C-215ENST00000487701 HPS1Q92902 700 aa9.41□□□□□ -0.9
SEC22C-215ENST00000487701 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
SEC22C-215ENST00000487701 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
SEC22C-215ENST00000487701 PRAG1Q86YV5 1406 aa9.4□□□□□ -0.9
SEC22C-215ENST00000487701 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
SEC22C-215ENST00000487701 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
SEC22C-215ENST00000487701 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
SEC22C-215ENST00000487701 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
SEC22C-215ENST00000487701 AMOTL2Q9Y2J4 779 aa9.4□□□□□ -0.9
SEC22C-215ENST00000487701 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
SEC22C-215ENST00000487701 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
SEC22C-215ENST00000487701 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
SEC22C-215ENST00000487701 GPKOWQ92917 476 aaPredicted RBP eCLIP9.39□□□□□ -0.91
SEC22C-215ENST00000487701 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
SEC22C-215ENST00000487701 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
SEC22C-215ENST00000487701 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
SEC22C-215ENST00000487701 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
SEC22C-215ENST00000487701 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
SEC22C-215ENST00000487701 ROBO2Q9HCK4 1378 aa9.37□□□□□ -0.91
SEC22C-215ENST00000487701 ARHGEF28Q8N1W1 1705 aaKnown RBP9.37□□□□□ -0.91
SEC22C-215ENST00000487701 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
SEC22C-215ENST00000487701 TECPR2O15040 1411 aa9.37□□□□□ -0.91
SEC22C-215ENST00000487701 MSH6P52701 1360 aa9.37□□□□□ -0.91
SEC22C-215ENST00000487701 ZC3H4Q9UPT8 1303 aaKnown RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 TOM1O60784 492 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 NNTQ13423 1086 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 SH3RF1Q7Z6J0 888 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 DCAF11Q8TEB1 546 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 SIN3AQ96ST3 1273 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 RGPD8O14715 1765 aaPredicted RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 YTHDC2Q9H6S0 1430 aaKnown RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 ADGRL3Q9HAR2 1447 aa9.36□□□□□ -0.91
SEC22C-215ENST00000487701 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
SEC22C-215ENST00000487701 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms