RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 ADRA2BP18089 450 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
CLIP2-207ENST00000487447 EIF4A1P60842 406 aaKnown RBP15.28■□□□□ 0.04
CLIP2-207ENST00000487447 COL23A1Q86Y22 540 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-207ENST00000487447 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 MIER1Q8N108 512 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
CLIP2-207ENST00000487447 BCORQ6W2J9 1755 aa15.27■□□□□ 0.04
CLIP2-207ENST00000487447 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
CLIP2-207ENST00000487447 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
CLIP2-207ENST00000487447 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.04
CLIP2-207ENST00000487447 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-207ENST00000487447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
CLIP2-207ENST00000487447 GNPATO15228 680 aa15.26■□□□□ 0.03
CLIP2-207ENST00000487447 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
CLIP2-207ENST00000487447 CALD1Q05682 793 aaKnown RBP15.26■□□□□ 0.03
CLIP2-207ENST00000487447 ARXQ96QS3 562 aa15.26■□□□□ 0.03
CLIP2-207ENST00000487447 TSPYL4Q9UJ04 414 aa15.26■□□□□ 0.03
CLIP2-207ENST00000487447 IL16Q14005 1332 aa15.25■□□□□ 0.03
CLIP2-207ENST00000487447 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-207ENST00000487447 STARD3NLO95772 234 aa15.25■□□□□ 0.03
CLIP2-207ENST00000487447 WWC1Q8IX03 1113 aa15.25■□□□□ 0.03
CLIP2-207ENST00000487447 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
CLIP2-207ENST00000487447 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
CLIP2-207ENST00000487447 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
CLIP2-207ENST00000487447 ZNF521Q96K83 1311 aa15.23■□□□□ 0.03
CLIP2-207ENST00000487447 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
CLIP2-207ENST00000487447 GNAI1P63096 354 aa15.23■□□□□ 0.03
CLIP2-207ENST00000487447 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
CLIP2-207ENST00000487447 COL15A1P39059 1388 aa15.23■□□□□ 0.03
CLIP2-207ENST00000487447 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-207ENST00000487447 EIF5P55010 431 aaKnown RBP15.22■□□□□ 0.03
CLIP2-207ENST00000487447 SMIM5Q71RC9 77 aa15.22■□□□□ 0.03
CLIP2-207ENST00000487447 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
CLIP2-207ENST00000487447 ZNF784Q8NCA9 323 aaPredicted RBP15.22■□□□□ 0.03
CLIP2-207ENST00000487447 ARHGEF1Q92888 912 aaKnown RBP15.22■□□□□ 0.03
CLIP2-207ENST00000487447 ERBB4Q15303 1308 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 PHF14O94880 888 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 HOXB7P09629 217 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 WDR63Q8IWG1 891 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
CLIP2-207ENST00000487447 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
CLIP2-207ENST00000487447 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
CLIP2-207ENST00000487447 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
CLIP2-207ENST00000487447 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
CLIP2-207ENST00000487447 A1BGP04217 495 aa15.19■□□□□ 0.02
CLIP2-207ENST00000487447 GPR162Q16538 588 aa15.19■□□□□ 0.02
CLIP2-207ENST00000487447 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
CLIP2-207ENST00000487447 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
CLIP2-207ENST00000487447 GYS1P13807 737 aa15.18■□□□□ 0.02
CLIP2-207ENST00000487447 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
CLIP2-207ENST00000487447 RGL2O15211 777 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 MSH5O43196 834 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 CANXP27824 592 aaKnown RBP15.17■□□□□ 0.02
CLIP2-207ENST00000487447 POLD1P28340 1107 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 RFC4P35249 363 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 LRP10Q7Z4F1 713 aa15.17■□□□□ 0.02
CLIP2-207ENST00000487447 PELP1Q8IZL8 1130 aaKnown RBP15.17■□□□□ 0.02
CLIP2-207ENST00000487447 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
CLIP2-207ENST00000487447 A0A087WZG4 1122 aa15.16■□□□□ 0.02
CLIP2-207ENST00000487447 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
CLIP2-207ENST00000487447 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
CLIP2-207ENST00000487447 PDIA6Q15084 440 aa15.15■□□□□ 0.02
CLIP2-207ENST00000487447 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
CLIP2-207ENST00000487447 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
CLIP2-207ENST00000487447 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
CLIP2-207ENST00000487447 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
CLIP2-207ENST00000487447 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
CLIP2-207ENST00000487447 ANKRD36CQ5JPF3 1778 aa15.14■□□□□ 0.01
CLIP2-207ENST00000487447 NLGN2Q8NFZ4 835 aa15.14■□□□□ 0.01
CLIP2-207ENST00000487447 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-207ENST00000487447 NUP98P52948 1817 aa15.14■□□□□ 0.01
CLIP2-207ENST00000487447 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
CLIP2-207ENST00000487447 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
CLIP2-207ENST00000487447 USPL1Q5W0Q7 1092 aa15.13■□□□□ 0.01
CLIP2-207ENST00000487447 MSL1Q68DK7 614 aa15.13■□□□□ 0.01
CLIP2-207ENST00000487447 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
CLIP2-207ENST00000487447 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
CLIP2-207ENST00000487447 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-207ENST00000487447 TM4SF1P30408 202 aa15.12■□□□□ 0.01
CLIP2-207ENST00000487447 PIP4K2AP48426 406 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-207ENST00000487447 FKBP8Q14318 412 aa15.12■□□□□ 0.01
CLIP2-207ENST00000487447 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLIP2-207ENST00000487447 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
CLIP2-207ENST00000487447 C10orf71Q711Q0 1435 aa15.11■□□□□ 0.01
CLIP2-207ENST00000487447 UTRNP46939 3433 aa15.11■□□□□ 0.01
CLIP2-207ENST00000487447 ZPR1O75312 459 aa15.11■□□□□ 0.01
CLIP2-207ENST00000487447 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
CLIP2-207ENST00000487447 DZIP3Q86Y13 1208 aaKnown RBP15.11■□□□□ 0.01
CLIP2-207ENST00000487447 ARFGEF2Q9Y6D5 1785 aa15.11■□□□□ 0.01
CLIP2-207ENST00000487447 CLEC4GQ6UXB4 293 aa15.1■□□□□ 0.01
CLIP2-207ENST00000487447 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
CLIP2-207ENST00000487447 TBC1D2BQ9UPU7 963 aa15.1■□□□□ 0.01
CLIP2-207ENST00000487447 ATP10DQ9P241 1426 aa15.09■□□□□ 0.01
CLIP2-207ENST00000487447 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
CLIP2-207ENST00000487447 MMP10P09238 476 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms