RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
ECHDC2-213ENST00000487040 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
ECHDC2-213ENST00000487040 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
ECHDC2-213ENST00000487040 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
ECHDC2-213ENST00000487040 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.24
ECHDC2-213ENST00000487040 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
ECHDC2-213ENST00000487040 NLGN1Q8N2Q7 840 aa16.57■□□□□ 0.24
ECHDC2-213ENST00000487040 TRIM35Q9UPQ4 493 aa16.57■□□□□ 0.24
ECHDC2-213ENST00000487040 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
ECHDC2-213ENST00000487040 APAF1O14727 1248 aa16.56■□□□□ 0.24
ECHDC2-213ENST00000487040 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
ECHDC2-213ENST00000487040 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
ECHDC2-213ENST00000487040 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
ECHDC2-213ENST00000487040 COL15A1P39059 1388 aa16.55■□□□□ 0.24
ECHDC2-213ENST00000487040 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
ECHDC2-213ENST00000487040 A0A087WZG4 1122 aa16.55■□□□□ 0.24
ECHDC2-213ENST00000487040 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
ECHDC2-213ENST00000487040 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
ECHDC2-213ENST00000487040 ZPR1O75312 459 aa16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 GYS1P13807 737 aa16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 NARFQ9UHQ1 456 aa16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
ECHDC2-213ENST00000487040 CHL1O00533 1208 aa16.52■□□□□ 0.24
ECHDC2-213ENST00000487040 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
ECHDC2-213ENST00000487040 SYT17Q9BSW7 474 aa16.52■□□□□ 0.24
ECHDC2-213ENST00000487040 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
ECHDC2-213ENST00000487040 MMP10P09238 476 aa16.51■□□□□ 0.23
ECHDC2-213ENST00000487040 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
ECHDC2-213ENST00000487040 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
ECHDC2-213ENST00000487040 A1BGP04217 495 aa16.5■□□□□ 0.23
ECHDC2-213ENST00000487040 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
ECHDC2-213ENST00000487040 USPL1Q5W0Q7 1092 aa16.49■□□□□ 0.23
ECHDC2-213ENST00000487040 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
ECHDC2-213ENST00000487040 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 GNAI1P63096 354 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 PARP3Q9Y6F1 533 aa16.48■□□□□ 0.23
ECHDC2-213ENST00000487040 CCER2I3L3R5 266 aa16.47■□□□□ 0.23
ECHDC2-213ENST00000487040 ZNF853P0CG23 659 aa16.47■□□□□ 0.23
ECHDC2-213ENST00000487040 FKBP8Q14318 412 aa16.47■□□□□ 0.23
ECHDC2-213ENST00000487040 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
ECHDC2-213ENST00000487040 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
ECHDC2-213ENST00000487040 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 RGL2O15211 777 aa16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 HOXB7P09629 217 aa16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
ECHDC2-213ENST00000487040 TM4SF1P30408 202 aa16.45■□□□□ 0.22
ECHDC2-213ENST00000487040 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
ECHDC2-213ENST00000487040 MBIPQ9NS73 344 aa16.45■□□□□ 0.22
ECHDC2-213ENST00000487040 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
ECHDC2-213ENST00000487040 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
ECHDC2-213ENST00000487040 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
ECHDC2-213ENST00000487040 C10orf71Q711Q0 1435 aa16.44■□□□□ 0.22
ECHDC2-213ENST00000487040 IL16Q14005 1332 aa16.44■□□□□ 0.22
ECHDC2-213ENST00000487040 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 DDR1Q08345 913 aa16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
ECHDC2-213ENST00000487040 POLRMTO00411 1230 aaKnown RBP16.42■□□□□ 0.22
ECHDC2-213ENST00000487040 NFIXQ14938 502 aa16.42■□□□□ 0.22
ECHDC2-213ENST00000487040 NLGN2Q8NFZ4 835 aa16.42■□□□□ 0.22
ECHDC2-213ENST00000487040 KIF13BQ9NQT8 1826 aa16.41■□□□□ 0.22
ECHDC2-213ENST00000487040 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
ECHDC2-213ENST00000487040 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
ECHDC2-213ENST00000487040 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
ECHDC2-213ENST00000487040 TGFB2P61812 414 aa16.4■□□□□ 0.22
ECHDC2-213ENST00000487040 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 MYL6BP14649 208 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
ECHDC2-213ENST00000487040 SERPINB2P05120 415 aa16.38■□□□□ 0.21
ECHDC2-213ENST00000487040 PDIA6Q15084 440 aa16.38■□□□□ 0.21
ECHDC2-213ENST00000487040 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
ECHDC2-213ENST00000487040 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
ECHDC2-213ENST00000487040 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
ECHDC2-213ENST00000487040 GPR162Q16538 588 aa16.37■□□□□ 0.21
ECHDC2-213ENST00000487040 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
ECHDC2-213ENST00000487040 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
ECHDC2-213ENST00000487040 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms