RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
CACNA2D1-211ENST00000486539 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
CACNA2D1-211ENST00000486539 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
CACNA2D1-211ENST00000486539 XAGE2Q96GT9 111 aa9.32□□□□□ -0.92
CACNA2D1-211ENST00000486539 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
CACNA2D1-211ENST00000486539 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
CACNA2D1-211ENST00000486539 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
CACNA2D1-211ENST00000486539 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
CACNA2D1-211ENST00000486539 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
CACNA2D1-211ENST00000486539 PCDHB11Q9Y5F2 797 aa9.31□□□□□ -0.92
CACNA2D1-211ENST00000486539 AP1G2O75843 785 aa9.3□□□□□ -0.92
CACNA2D1-211ENST00000486539 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
CACNA2D1-211ENST00000486539 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
CACNA2D1-211ENST00000486539 RNF112Q9ULX5 631 aa9.3□□□□□ -0.92
CACNA2D1-211ENST00000486539 TNP2Q05952 138 aa9.29□□□□□ -0.92
CACNA2D1-211ENST00000486539 FZD5Q13467 585 aa9.29□□□□□ -0.92
CACNA2D1-211ENST00000486539 KRTAP4-9Q9BYQ8 210 aa9.29□□□□□ -0.92
CACNA2D1-211ENST00000486539 CD33P20138 364 aa9.28□□□□□ -0.92
CACNA2D1-211ENST00000486539 PCBP4P57723 403 aaKnown RBP9.28□□□□□ -0.92
CACNA2D1-211ENST00000486539 ADGRE1Q14246 886 aa9.28□□□□□ -0.92
CACNA2D1-211ENST00000486539 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
CACNA2D1-211ENST00000486539 TXNRD3Q86VQ6 643 aa9.27□□□□□ -0.93
CACNA2D1-211ENST00000486539 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
CACNA2D1-211ENST00000486539 MYCP01106 439 aaPredicted RBP9.26□□□□□ -0.93
CACNA2D1-211ENST00000486539 NRG1Q02297 640 aaPredicted RBP9.26□□□□□ -0.93
CACNA2D1-211ENST00000486539 PDE4DQ08499 809 aa9.26□□□□□ -0.93
CACNA2D1-211ENST00000486539 HMX1Q9NP08 348 aaPredicted RBP9.26□□□□□ -0.93
CACNA2D1-211ENST00000486539 DCDC2BA2VCK2 349 aa9.25□□□□□ -0.93
CACNA2D1-211ENST00000486539 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
CACNA2D1-211ENST00000486539 MBTPS1Q14703 1052 aa9.25□□□□□ -0.93
CACNA2D1-211ENST00000486539 GRIK4Q16099 956 aa9.25□□□□□ -0.93
CACNA2D1-211ENST00000486539 KHNYNO15037 678 aaKnown RBP9.24□□□□□ -0.93
CACNA2D1-211ENST00000486539 SKIV2LQ15477 1246 aaKnown RBP9.24□□□□□ -0.93
CACNA2D1-211ENST00000486539 M0R082 166 aa9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 USP17L8P0C7I0 530 aa9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 FAM157BP0CG42 384 aa9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 LAMC2Q13753 1193 aa9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 ZNF417Q8TAU3 575 aa9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 ZNF587Q96SQ5 575 aaPredicted RBP9.23□□□□□ -0.93
CACNA2D1-211ENST00000486539 COL9A3Q14050 684 aaPredicted RBP9.22□□□□□ -0.93
CACNA2D1-211ENST00000486539 TP53INP1Q96A56 240 aa9.22□□□□□ -0.93
CACNA2D1-211ENST00000486539 MDFIQ99750 246 aa9.22□□□□□ -0.93
CACNA2D1-211ENST00000486539 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
CACNA2D1-211ENST00000486539 ADARB2-AS1A8MUL3 147 aa9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 ATP4AP20648 1035 aa9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 PLA2G4AP47712 749 aa9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 IRAK1P51617 712 aa9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 MARK1Q9P0L2 795 aa9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
CACNA2D1-211ENST00000486539 SIN3BO75182 1162 aa9.2□□□□□ -0.94
CACNA2D1-211ENST00000486539 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
CACNA2D1-211ENST00000486539 LENG1Q96BZ8 264 aaPredicted RBP9.2□□□□□ -0.94
CACNA2D1-211ENST00000486539 PCMTD2Q9NV79 361 aa9.2□□□□□ -0.94
CACNA2D1-211ENST00000486539 A0A1W2PNR3 127 aa9.19□□□□□ -0.94
CACNA2D1-211ENST00000486539 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
CACNA2D1-211ENST00000486539 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
CACNA2D1-211ENST00000486539 FBXO31Q5XUX0 539 aaPredicted RBP9.18□□□□□ -0.94
CACNA2D1-211ENST00000486539 SYT9Q86SS6 491 aa9.18□□□□□ -0.94
CACNA2D1-211ENST00000486539 NID1P14543 1247 aa9.17□□□□□ -0.94
CACNA2D1-211ENST00000486539 TLR1Q15399 786 aa9.17□□□□□ -0.94
CACNA2D1-211ENST00000486539 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CACNA2D1-211ENST00000486539 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
CACNA2D1-211ENST00000486539 MICALL1Q8N3F8 863 aa9.17□□□□□ -0.94
CACNA2D1-211ENST00000486539 SELPP16109 830 aa9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 HAP1P54257 671 aaPredicted RBP9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 NBPF1Q3BBV0 1214 aa9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 SLC51AQ86UW1 340 aa9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 NIFKQ9BYG3 293 aaKnown RBP9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 KRTAP4-2Q9BYR5 136 aa9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
CACNA2D1-211ENST00000486539 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
CACNA2D1-211ENST00000486539 AIDAQ96BJ3 306 aa9.15□□□□□ -0.94
CACNA2D1-211ENST00000486539 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
CACNA2D1-211ENST00000486539 TATP17735 454 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D1-211ENST00000486539 TRAPPC3LQ5T215 181 aa9.14□□□□□ -0.95
CACNA2D1-211ENST00000486539 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D1-211ENST00000486539 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
CACNA2D1-211ENST00000486539 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
CACNA2D1-211ENST00000486539 ALBP02768 609 aa9.13□□□□□ -0.95
CACNA2D1-211ENST00000486539 RAC1P63000 192 aa9.13□□□□□ -0.95
CACNA2D1-211ENST00000486539 EFSO43281 561 aa9.12□□□□□ -0.95
CACNA2D1-211ENST00000486539 NR1H3Q13133 447 aa9.12□□□□□ -0.95
CACNA2D1-211ENST00000486539 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
CACNA2D1-211ENST00000486539 ZDHHC3Q9NYG2 299 aa9.12□□□□□ -0.95
CACNA2D1-211ENST00000486539 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
CACNA2D1-211ENST00000486539 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
CACNA2D1-211ENST00000486539 TAL1P17542 331 aaPredicted RBP9.1□□□□□ -0.95
CACNA2D1-211ENST00000486539 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
CACNA2D1-211ENST00000486539 LILRB5O75023 590 aa9.09□□□□□ -0.95
CACNA2D1-211ENST00000486539 NEUROD1Q13562 356 aa9.09□□□□□ -0.95
CACNA2D1-211ENST00000486539 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
CACNA2D1-211ENST00000486539 USP21Q9UK80 565 aa9.09□□□□□ -0.95
CACNA2D1-211ENST00000486539 C8orf86Q6ZUL3 223 aa9.08□□□□□ -0.96
CACNA2D1-211ENST00000486539 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
CACNA2D1-211ENST00000486539 USP4Q13107 963 aa9.07□□□□□ -0.96
CACNA2D1-211ENST00000486539 ADH7P40394 386 aa9.06□□□□□ -0.96
CACNA2D1-211ENST00000486539 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
CACNA2D1-211ENST00000486539 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
CACNA2D1-211ENST00000486539 CD97P48960 835 aa9.04□□□□□ -0.96
CACNA2D1-211ENST00000486539 SHISA2Q6UWI4 295 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms