RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 AEBP2Q6ZN18 517 aaPredicted RBP32.86■■■□□ 2.85
CACNA2D1-211ENST00000486539 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
CACNA2D1-211ENST00000486539 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
CACNA2D1-211ENST00000486539 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
CACNA2D1-211ENST00000486539 FOXD1Q16676 465 aa26.4■■□□□ 1.82
CACNA2D1-211ENST00000486539 POTEDQ86YR6 584 aa25.81■■□□□ 1.72
CACNA2D1-211ENST00000486539 MSH5O43196 834 aa25.2■■□□□ 1.62
CACNA2D1-211ENST00000486539 PIAS4Q8N2W9 510 aaPredicted RBP24.53■■□□□ 1.52
CACNA2D1-211ENST00000486539 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CACNA2D1-211ENST00000486539 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
CACNA2D1-211ENST00000486539 ADRA2BP18089 450 aa23.87■■□□□ 1.41
CACNA2D1-211ENST00000486539 DMRT2Q9Y5R5 561 aa22.33■■□□□ 1.17
CACNA2D1-211ENST00000486539 MAPK8IP2Q13387 824 aaPredicted RBP22.14■■□□□ 1.13
CACNA2D1-211ENST00000486539 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
CACNA2D1-211ENST00000486539 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
CACNA2D1-211ENST00000486539 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
CACNA2D1-211ENST00000486539 RNF39Q9H2S5 420 aa21.33■■□□□ 1.01
CACNA2D1-211ENST00000486539 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
CACNA2D1-211ENST00000486539 C1QBPQ07021 282 aaKnown RBP21.06■□□□□ 0.96
CACNA2D1-211ENST00000486539 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
CACNA2D1-211ENST00000486539 RNF216Q9NWF9 866 aaPredicted RBP20.85■□□□□ 0.93
CACNA2D1-211ENST00000486539 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
CACNA2D1-211ENST00000486539 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
CACNA2D1-211ENST00000486539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
CACNA2D1-211ENST00000486539 POTEHQ6S545 545 aa20.11■□□□□ 0.81
CACNA2D1-211ENST00000486539 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
CACNA2D1-211ENST00000486539 DSG3P32926 999 aa19.68■□□□□ 0.74
CACNA2D1-211ENST00000486539 CAPN15O75808 1086 aa19.62■□□□□ 0.73
CACNA2D1-211ENST00000486539 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
CACNA2D1-211ENST00000486539 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
CACNA2D1-211ENST00000486539 SPINK5Q9NQ38 1064 aaPredicted RBP19.52■□□□□ 0.72
CACNA2D1-211ENST00000486539 APLP2Q06481 763 aa19.24■□□□□ 0.67
CACNA2D1-211ENST00000486539 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
CACNA2D1-211ENST00000486539 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
CACNA2D1-211ENST00000486539 ABCB7O75027 752 aa19.01■□□□□ 0.63
CACNA2D1-211ENST00000486539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
CACNA2D1-211ENST00000486539 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
CACNA2D1-211ENST00000486539 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
CACNA2D1-211ENST00000486539 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
CACNA2D1-211ENST00000486539 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
CACNA2D1-211ENST00000486539 CHRDL2Q6WN34 429 aa18.74■□□□□ 0.59
CACNA2D1-211ENST00000486539 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
CACNA2D1-211ENST00000486539 KCNA4P22459 653 aa18.44■□□□□ 0.54
CACNA2D1-211ENST00000486539 POLA2Q14181 598 aa18.4■□□□□ 0.54
CACNA2D1-211ENST00000486539 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
CACNA2D1-211ENST00000486539 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
CACNA2D1-211ENST00000486539 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
CACNA2D1-211ENST00000486539 PIP4P2Q8N4L2 257 aa18.08■□□□□ 0.48
CACNA2D1-211ENST00000486539 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
CACNA2D1-211ENST00000486539 HAX1O00165 279 aa18.01■□□□□ 0.47
CACNA2D1-211ENST00000486539 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA2D1-211ENST00000486539 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
CACNA2D1-211ENST00000486539 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
CACNA2D1-211ENST00000486539 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D1-211ENST00000486539 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
CACNA2D1-211ENST00000486539 EVX2Q03828 476 aa17.56■□□□□ 0.4
CACNA2D1-211ENST00000486539 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
CACNA2D1-211ENST00000486539 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
CACNA2D1-211ENST00000486539 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
CACNA2D1-211ENST00000486539 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
CACNA2D1-211ENST00000486539 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
CACNA2D1-211ENST00000486539 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
CACNA2D1-211ENST00000486539 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
CACNA2D1-211ENST00000486539 LHX8Q68G74 356 aa17.32■□□□□ 0.36
CACNA2D1-211ENST00000486539 FBLN2P98095 1184 aa17.29■□□□□ 0.36
CACNA2D1-211ENST00000486539 GABBR2O75899 941 aa17.25■□□□□ 0.35
CACNA2D1-211ENST00000486539 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
CACNA2D1-211ENST00000486539 ATXN8OSP0DMR3 200 aa17.21■□□□□ 0.35
CACNA2D1-211ENST00000486539 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
CACNA2D1-211ENST00000486539 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
CACNA2D1-211ENST00000486539 CLCN6P51797 869 aa16.95■□□□□ 0.3
CACNA2D1-211ENST00000486539 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
CACNA2D1-211ENST00000486539 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
CACNA2D1-211ENST00000486539 ZBTB22O15209 634 aa16.88■□□□□ 0.29
CACNA2D1-211ENST00000486539 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
CACNA2D1-211ENST00000486539 PLSCR2Q9NRY7 297 aa16.84■□□□□ 0.29
CACNA2D1-211ENST00000486539 CD44P16070 742 aaKnown RBP16.8■□□□□ 0.28
CACNA2D1-211ENST00000486539 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
CACNA2D1-211ENST00000486539 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA2D1-211ENST00000486539 DCBLD2Q96PD2 775 aa16.7■□□□□ 0.26
CACNA2D1-211ENST00000486539 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D1-211ENST00000486539 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
CACNA2D1-211ENST00000486539 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
CACNA2D1-211ENST00000486539 OTUD5Q96G74 571 aa16.38■□□□□ 0.21
CACNA2D1-211ENST00000486539 POTEMA6NI47 508 aa16.34■□□□□ 0.21
CACNA2D1-211ENST00000486539 GALR2O43603 387 aaPredicted RBP16.29■□□□□ 0.2
CACNA2D1-211ENST00000486539 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
CACNA2D1-211ENST00000486539 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CACNA2D1-211ENST00000486539 POTEGQ6S5H5 508 aa16.25■□□□□ 0.19
CACNA2D1-211ENST00000486539 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
CACNA2D1-211ENST00000486539 POTEB2H3BUK9 544 aa16.21■□□□□ 0.19
CACNA2D1-211ENST00000486539 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
CACNA2D1-211ENST00000486539 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
CACNA2D1-211ENST00000486539 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
CACNA2D1-211ENST00000486539 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA2D1-211ENST00000486539 C7P10643 843 aa16.01■□□□□ 0.15
CACNA2D1-211ENST00000486539 SLC39A7Q92504 469 aa16.01■□□□□ 0.15
CACNA2D1-211ENST00000486539 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
CACNA2D1-211ENST00000486539 METRNQ9UJH8 293 aa16■□□□□ 0.15
CACNA2D1-211ENST00000486539 ASTLQ6HA08 431 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms