RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
HMG20B-211ENST00000486028 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
HMG20B-211ENST00000486028 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
HMG20B-211ENST00000486028 RFC4P35249 363 aa16.33■□□□□ 0.2
HMG20B-211ENST00000486028 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
HMG20B-211ENST00000486028 ARXQ96QS3 562 aa16.33■□□□□ 0.2
HMG20B-211ENST00000486028 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
HMG20B-211ENST00000486028 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.2
HMG20B-211ENST00000486028 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.2
HMG20B-211ENST00000486028 APAF1O14727 1248 aa16.32■□□□□ 0.2
HMG20B-211ENST00000486028 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
HMG20B-211ENST00000486028 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
HMG20B-211ENST00000486028 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
HMG20B-211ENST00000486028 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
HMG20B-211ENST00000486028 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
HMG20B-211ENST00000486028 UBR3Q6ZT12 1888 aa16.31■□□□□ 0.2
HMG20B-211ENST00000486028 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
HMG20B-211ENST00000486028 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
HMG20B-211ENST00000486028 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
HMG20B-211ENST00000486028 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
HMG20B-211ENST00000486028 TJP1Q07157 1748 aa16.3■□□□□ 0.2
HMG20B-211ENST00000486028 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
HMG20B-211ENST00000486028 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
HMG20B-211ENST00000486028 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
HMG20B-211ENST00000486028 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
HMG20B-211ENST00000486028 ZBTB1Q9Y2K1 713 aa16.29■□□□□ 0.2
HMG20B-211ENST00000486028 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
HMG20B-211ENST00000486028 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
HMG20B-211ENST00000486028 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
HMG20B-211ENST00000486028 A0A087WZG4 1122 aa16.27■□□□□ 0.2
HMG20B-211ENST00000486028 ZPR1O75312 459 aa16.27■□□□□ 0.2
HMG20B-211ENST00000486028 A1BGP04217 495 aa16.27■□□□□ 0.2
HMG20B-211ENST00000486028 CALD1Q05682 793 aaKnown RBP16.27■□□□□ 0.2
HMG20B-211ENST00000486028 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
HMG20B-211ENST00000486028 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
HMG20B-211ENST00000486028 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
HMG20B-211ENST00000486028 CHL1O00533 1208 aa16.26■□□□□ 0.19
HMG20B-211ENST00000486028 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
HMG20B-211ENST00000486028 GYS1P13807 737 aa16.26■□□□□ 0.19
HMG20B-211ENST00000486028 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
HMG20B-211ENST00000486028 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
HMG20B-211ENST00000486028 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
HMG20B-211ENST00000486028 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
HMG20B-211ENST00000486028 FAM9BQ8IZU0 186 aa16.25■□□□□ 0.19
HMG20B-211ENST00000486028 SRP68Q9UHB9 627 aaKnown RBP16.25■□□□□ 0.19
HMG20B-211ENST00000486028 MMP10P09238 476 aa16.24■□□□□ 0.19
HMG20B-211ENST00000486028 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
HMG20B-211ENST00000486028 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
HMG20B-211ENST00000486028 ZNF330Q9Y3S2 320 aaPredicted RBP16.24■□□□□ 0.19
HMG20B-211ENST00000486028 COL15A1P39059 1388 aa16.24■□□□□ 0.19
HMG20B-211ENST00000486028 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
HMG20B-211ENST00000486028 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
HMG20B-211ENST00000486028 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
HMG20B-211ENST00000486028 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
HMG20B-211ENST00000486028 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
HMG20B-211ENST00000486028 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
HMG20B-211ENST00000486028 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
HMG20B-211ENST00000486028 GNAI1P63096 354 aa16.21■□□□□ 0.19
HMG20B-211ENST00000486028 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
HMG20B-211ENST00000486028 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
HMG20B-211ENST00000486028 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
HMG20B-211ENST00000486028 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
HMG20B-211ENST00000486028 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
HMG20B-211ENST00000486028 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
HMG20B-211ENST00000486028 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
HMG20B-211ENST00000486028 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
HMG20B-211ENST00000486028 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
HMG20B-211ENST00000486028 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
HMG20B-211ENST00000486028 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
HMG20B-211ENST00000486028 TM4SF1P30408 202 aa16.18■□□□□ 0.18
HMG20B-211ENST00000486028 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
HMG20B-211ENST00000486028 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
HMG20B-211ENST00000486028 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
HMG20B-211ENST00000486028 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 CAMTA2O94983 1202 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 MYL6BP14649 208 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 NFIXQ14938 502 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 IL16Q14005 1332 aa16.16■□□□□ 0.18
HMG20B-211ENST00000486028 HOXB7P09629 217 aa16.15■□□□□ 0.18
HMG20B-211ENST00000486028 DDR1Q08345 913 aa16.15■□□□□ 0.18
HMG20B-211ENST00000486028 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
HMG20B-211ENST00000486028 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
HMG20B-211ENST00000486028 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
HMG20B-211ENST00000486028 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
HMG20B-211ENST00000486028 RGL2O15211 777 aa16.14■□□□□ 0.17
HMG20B-211ENST00000486028 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
HMG20B-211ENST00000486028 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
HMG20B-211ENST00000486028 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
HMG20B-211ENST00000486028 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 TBC1D9BQ66K14 1250 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 MIER1Q8N108 512 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms