RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
HPS4-214ENST00000485842 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
HPS4-214ENST00000485842 TEX13AQ9BXU3 409 aaPredicted RBP15.45■□□□□ 0.06
HPS4-214ENST00000485842 BABAM1Q9NWV8 329 aa15.45■□□□□ 0.06
HPS4-214ENST00000485842 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
HPS4-214ENST00000485842 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
HPS4-214ENST00000485842 CHL1O00533 1208 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 RPS6KA4O75676 772 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
HPS4-214ENST00000485842 GNAI1P63096 354 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
HPS4-214ENST00000485842 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
HPS4-214ENST00000485842 LRP5O75197 1615 aa15.43■□□□□ 0.06
HPS4-214ENST00000485842 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
HPS4-214ENST00000485842 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
HPS4-214ENST00000485842 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
HPS4-214ENST00000485842 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
HPS4-214ENST00000485842 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
HPS4-214ENST00000485842 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
HPS4-214ENST00000485842 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
HPS4-214ENST00000485842 SPON1Q9HCB6 807 aa15.42■□□□□ 0.06
HPS4-214ENST00000485842 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
HPS4-214ENST00000485842 COL15A1P39059 1388 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 A1BGP04217 495 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 ADRA2BP18089 450 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 KRT24Q2M2I5 525 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
HPS4-214ENST00000485842 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
HPS4-214ENST00000485842 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
HPS4-214ENST00000485842 RFC4P35249 363 aa15.4■□□□□ 0.06
HPS4-214ENST00000485842 NGEFQ8N5V2 710 aa15.4■□□□□ 0.06
HPS4-214ENST00000485842 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
HPS4-214ENST00000485842 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
HPS4-214ENST00000485842 IL16Q14005 1332 aa15.39■□□□□ 0.05
HPS4-214ENST00000485842 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
HPS4-214ENST00000485842 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
HPS4-214ENST00000485842 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
HPS4-214ENST00000485842 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
HPS4-214ENST00000485842 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
HPS4-214ENST00000485842 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
HPS4-214ENST00000485842 IL6STP40189 918 aaPredicted RBP15.37■□□□□ 0.05
HPS4-214ENST00000485842 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
HPS4-214ENST00000485842 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
HPS4-214ENST00000485842 ARXQ96QS3 562 aa15.37■□□□□ 0.05
HPS4-214ENST00000485842 PPP1R1BQ9UD71 204 aaPredicted RBP15.37■□□□□ 0.05
HPS4-214ENST00000485842 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
HPS4-214ENST00000485842 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 A0A087WZG4 1122 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
HPS4-214ENST00000485842 ZPR1O75312 459 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 MYL6BP14649 208 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 POLD1P28340 1107 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 PTGER2P43116 358 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 EIF5P55010 431 aaKnown RBP15.36■□□□□ 0.05
HPS4-214ENST00000485842 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
HPS4-214ENST00000485842 GYS1P13807 737 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 USPL1Q5W0Q7 1092 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 TBC1D2BQ9UPU7 963 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 ZNF521Q96K83 1311 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
HPS4-214ENST00000485842 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 HOXB7P09629 217 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
HPS4-214ENST00000485842 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
HPS4-214ENST00000485842 ANXA1P04083 346 aa15.33■□□□□ 0.04
HPS4-214ENST00000485842 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
HPS4-214ENST00000485842 ERBB4Q15303 1308 aa15.33■□□□□ 0.04
HPS4-214ENST00000485842 MMP10P09238 476 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
HPS4-214ENST00000485842 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 FKBP8Q14318 412 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 PROSER3Q2NL68 480 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
HPS4-214ENST00000485842 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
HPS4-214ENST00000485842 CAMTA2O94983 1202 aa15.3■□□□□ 0.04
HPS4-214ENST00000485842 EXOSC9Q06265 439 aaKnown RBP15.3■□□□□ 0.04
HPS4-214ENST00000485842 PDIA6Q15084 440 aa15.3■□□□□ 0.04
HPS4-214ENST00000485842 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
HPS4-214ENST00000485842 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
HPS4-214ENST00000485842 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
HPS4-214ENST00000485842 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
HPS4-214ENST00000485842 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
HPS4-214ENST00000485842 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
HPS4-214ENST00000485842 E9PSI1 815 aa15.28■□□□□ 0.04
HPS4-214ENST00000485842 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
HPS4-214ENST00000485842 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
HPS4-214ENST00000485842 DBF4Q9UBU7 674 aaPredicted RBP15.28■□□□□ 0.04
HPS4-214ENST00000485842 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
HPS4-214ENST00000485842 DDR1Q08345 913 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 NFIXQ14938 502 aa15.27■□□□□ 0.04
HPS4-214ENST00000485842 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms