RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TUBGCP6Q96RT7 1819 aa16.44■□□□□ 0.22
PTCD1-205ENST00000485746 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
PTCD1-205ENST00000485746 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
PTCD1-205ENST00000485746 MMP10P09238 476 aa16.43■□□□□ 0.22
PTCD1-205ENST00000485746 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
PTCD1-205ENST00000485746 A0A087WZG4 1122 aa16.42■□□□□ 0.22
PTCD1-205ENST00000485746 GYS1P13807 737 aa16.42■□□□□ 0.22
PTCD1-205ENST00000485746 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
PTCD1-205ENST00000485746 ZNF831Q5JPB2 1677 aa16.41■□□□□ 0.22
PTCD1-205ENST00000485746 GPR162Q16538 588 aa16.41■□□□□ 0.22
PTCD1-205ENST00000485746 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
PTCD1-205ENST00000485746 TSPYL4Q9UJ04 414 aa16.41■□□□□ 0.22
PTCD1-205ENST00000485746 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
PTCD1-205ENST00000485746 A1BGP04217 495 aa16.4■□□□□ 0.22
PTCD1-205ENST00000485746 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
PTCD1-205ENST00000485746 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
PTCD1-205ENST00000485746 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
PTCD1-205ENST00000485746 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
PTCD1-205ENST00000485746 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.22
PTCD1-205ENST00000485746 COL15A1P39059 1388 aa16.39■□□□□ 0.21
PTCD1-205ENST00000485746 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
PTCD1-205ENST00000485746 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
PTCD1-205ENST00000485746 FKBP8Q14318 412 aa16.38■□□□□ 0.21
PTCD1-205ENST00000485746 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
PTCD1-205ENST00000485746 NARFQ9UHQ1 456 aa16.38■□□□□ 0.21
PTCD1-205ENST00000485746 TJP1Q07157 1748 aa16.38■□□□□ 0.21
PTCD1-205ENST00000485746 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
PTCD1-205ENST00000485746 APAF1O14727 1248 aa16.37■□□□□ 0.21
PTCD1-205ENST00000485746 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
PTCD1-205ENST00000485746 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
PTCD1-205ENST00000485746 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
PTCD1-205ENST00000485746 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
PTCD1-205ENST00000485746 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
PTCD1-205ENST00000485746 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
PTCD1-205ENST00000485746 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
PTCD1-205ENST00000485746 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
PTCD1-205ENST00000485746 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
PTCD1-205ENST00000485746 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
PTCD1-205ENST00000485746 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
PTCD1-205ENST00000485746 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
PTCD1-205ENST00000485746 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.21
PTCD1-205ENST00000485746 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
PTCD1-205ENST00000485746 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
PTCD1-205ENST00000485746 CICQ96RK0 1608 aaPredicted RBP16.33■□□□□ 0.2
PTCD1-205ENST00000485746 NPHP1O15259 732 aa16.32■□□□□ 0.2
PTCD1-205ENST00000485746 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
PTCD1-205ENST00000485746 TM4SF1P30408 202 aa16.32■□□□□ 0.2
PTCD1-205ENST00000485746 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
PTCD1-205ENST00000485746 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
PTCD1-205ENST00000485746 DDR1Q08345 913 aa16.31■□□□□ 0.2
PTCD1-205ENST00000485746 NFIXQ14938 502 aa16.31■□□□□ 0.2
PTCD1-205ENST00000485746 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
PTCD1-205ENST00000485746 CHL1O00533 1208 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 SERPINB2P05120 415 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 MYL6BP14649 208 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 YY1P25490 414 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 TGFB2P61812 414 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
PTCD1-205ENST00000485746 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 GRIN3BO60391 1043 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
PTCD1-205ENST00000485746 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 SETDB2Q96T68 719 aa16.29■□□□□ 0.2
PTCD1-205ENST00000485746 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
PTCD1-205ENST00000485746 GNAI1P63096 354 aa16.28■□□□□ 0.2
PTCD1-205ENST00000485746 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
PTCD1-205ENST00000485746 DPEP1P16444 411 aa16.27■□□□□ 0.2
PTCD1-205ENST00000485746 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
PTCD1-205ENST00000485746 C4AP0C0L4 1744 aa16.26■□□□□ 0.19
PTCD1-205ENST00000485746 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTCD1-205ENST00000485746 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
PTCD1-205ENST00000485746 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
PTCD1-205ENST00000485746 CLEC4GQ6UXB4 293 aa16.25■□□□□ 0.19
PTCD1-205ENST00000485746 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
PTCD1-205ENST00000485746 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
PTCD1-205ENST00000485746 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
PTCD1-205ENST00000485746 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
PTCD1-205ENST00000485746 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTCD1-205ENST00000485746 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
PTCD1-205ENST00000485746 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 CHRNA5P30532 468 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 ST5P78524 1137 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 DUSP27Q5VZP5 1158 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
PTCD1-205ENST00000485746 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
PTCD1-205ENST00000485746 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 ANXA1P04083 346 aa16.22■□□□□ 0.19
PTCD1-205ENST00000485746 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms