RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
APOE-205ENST00000485628 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.86
APOE-205ENST00000485628 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
APOE-205ENST00000485628 RC3H1Q5TC82 1133 aaKnown RBP20.4■□□□□ 0.86
APOE-205ENST00000485628 LINC00116Q8NCU8 138 aa20.4■□□□□ 0.86
APOE-205ENST00000485628 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
APOE-205ENST00000485628 CHMP4AQ9BY43 222 aa20.4■□□□□ 0.86
APOE-205ENST00000485628 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
APOE-205ENST00000485628 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
APOE-205ENST00000485628 NBPF14Q5TI25 921 aa20.39■□□□□ 0.85
APOE-205ENST00000485628 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
APOE-205ENST00000485628 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
APOE-205ENST00000485628 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.85
APOE-205ENST00000485628 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
APOE-205ENST00000485628 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.85
APOE-205ENST00000485628 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
APOE-205ENST00000485628 STARD3NLO95772 234 aa20.38■□□□□ 0.85
APOE-205ENST00000485628 KCNQ4P56696 695 aa20.38■□□□□ 0.85
APOE-205ENST00000485628 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
APOE-205ENST00000485628 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
APOE-205ENST00000485628 C4BP0C0L5 1744 aa20.37■□□□□ 0.85
APOE-205ENST00000485628 A1BGP04217 495 aa20.37■□□□□ 0.85
APOE-205ENST00000485628 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
APOE-205ENST00000485628 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
APOE-205ENST00000485628 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
APOE-205ENST00000485628 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
APOE-205ENST00000485628 EN1Q05925 392 aaPredicted RBP20.36■□□□□ 0.85
APOE-205ENST00000485628 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
APOE-205ENST00000485628 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
APOE-205ENST00000485628 BCAR3O75815 825 aa20.35■□□□□ 0.85
APOE-205ENST00000485628 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
APOE-205ENST00000485628 BAG6P46379 1132 aa20.35■□□□□ 0.85
APOE-205ENST00000485628 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
APOE-205ENST00000485628 EZH2Q15910 746 aaKnown RBP20.34■□□□□ 0.85
APOE-205ENST00000485628 DEFB132Q7Z7B7 95 aa20.34■□□□□ 0.85
APOE-205ENST00000485628 CCDC87Q9NVE4 849 aa20.34■□□□□ 0.85
APOE-205ENST00000485628 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
APOE-205ENST00000485628 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
APOE-205ENST00000485628 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
APOE-205ENST00000485628 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
APOE-205ENST00000485628 ZBTB1Q9Y2K1 713 aa20.33■□□□□ 0.85
APOE-205ENST00000485628 UBR3Q6ZT12 1888 aa20.33■□□□□ 0.84
APOE-205ENST00000485628 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
APOE-205ENST00000485628 SF3B2Q13435 895 aaKnown RBP20.32■□□□□ 0.84
APOE-205ENST00000485628 G2E3Q7L622 706 aa20.32■□□□□ 0.84
APOE-205ENST00000485628 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
APOE-205ENST00000485628 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
APOE-205ENST00000485628 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
APOE-205ENST00000485628 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 ANXA1P04083 346 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
APOE-205ENST00000485628 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 PHAXQ9H814 394 aaKnown RBP20.3■□□□□ 0.84
APOE-205ENST00000485628 SMC4Q9NTJ3 1288 aa20.3■□□□□ 0.84
APOE-205ENST00000485628 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
APOE-205ENST00000485628 FLIIQ13045 1269 aa20.27■□□□□ 0.84
APOE-205ENST00000485628 ZNF827Q17R98 1081 aa20.27■□□□□ 0.84
APOE-205ENST00000485628 TUBGCP6Q96RT7 1819 aa20.27■□□□□ 0.84
APOE-205ENST00000485628 QSER1Q2KHR3 1735 aa20.27■□□□□ 0.83
APOE-205ENST00000485628 PTPRCP08575 1304 aa20.27■□□□□ 0.83
APOE-205ENST00000485628 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
APOE-205ENST00000485628 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
APOE-205ENST00000485628 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
APOE-205ENST00000485628 KIF16BQ96L93 1317 aa20.26■□□□□ 0.83
APOE-205ENST00000485628 MYL6BP14649 208 aa20.25■□□□□ 0.83
APOE-205ENST00000485628 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
APOE-205ENST00000485628 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
APOE-205ENST00000485628 ADCY9O60503 1353 aa20.24■□□□□ 0.83
APOE-205ENST00000485628 RGL2O15211 777 aa20.24■□□□□ 0.83
APOE-205ENST00000485628 ADRA2BP18089 450 aa20.24■□□□□ 0.83
APOE-205ENST00000485628 TTLL7Q6ZT98 887 aa20.24■□□□□ 0.83
APOE-205ENST00000485628 COL15A1P39059 1388 aa20.23■□□□□ 0.83
APOE-205ENST00000485628 GNPATO15228 680 aa20.23■□□□□ 0.83
APOE-205ENST00000485628 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
APOE-205ENST00000485628 SSFA2P28290 1259 aa20.23■□□□□ 0.83
APOE-205ENST00000485628 ATF7IPQ6VMQ6 1270 aa20.23■□□□□ 0.83
APOE-205ENST00000485628 TRIM27P14373 513 aa20.22■□□□□ 0.83
APOE-205ENST00000485628 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
APOE-205ENST00000485628 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
APOE-205ENST00000485628 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
APOE-205ENST00000485628 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 IPO8O15397 1037 aaKnown RBP20.21■□□□□ 0.83
APOE-205ENST00000485628 RRP1P56182 461 aaKnown RBP20.21■□□□□ 0.83
APOE-205ENST00000485628 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 KSR2Q6VAB6 950 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 ANKRD13DQ6ZTN6 518 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 ARHGEF1Q92888 912 aaKnown RBP20.21■□□□□ 0.83
APOE-205ENST00000485628 AK7Q96M32 723 aa20.21■□□□□ 0.83
APOE-205ENST00000485628 A0A087WZG4 1122 aa20.2■□□□□ 0.82
APOE-205ENST00000485628 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
APOE-205ENST00000485628 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
APOE-205ENST00000485628 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
APOE-205ENST00000485628 N4BP2Q86UW6 1770 aaPredicted RBP20.2■□□□□ 0.82
APOE-205ENST00000485628 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
APOE-205ENST00000485628 ABCC4O15439 1325 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms