RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
PKDCC-207ENST00000485578 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
PKDCC-207ENST00000485578 ADCY9O60503 1353 aa18.58■□□□□ 0.57
PKDCC-207ENST00000485578 BTBD11A6QL63 1104 aa18.58■□□□□ 0.56
PKDCC-207ENST00000485578 NEFMP07197 916 aa18.58■□□□□ 0.56
PKDCC-207ENST00000485578 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
PKDCC-207ENST00000485578 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
PKDCC-207ENST00000485578 RIPK4P57078 832 aa18.57■□□□□ 0.56
PKDCC-207ENST00000485578 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
PKDCC-207ENST00000485578 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
PKDCC-207ENST00000485578 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
PKDCC-207ENST00000485578 SSFA2P28290 1259 aa18.56■□□□□ 0.56
PKDCC-207ENST00000485578 INTS5Q6P9B9 1019 aaKnown RBP18.56■□□□□ 0.56
PKDCC-207ENST00000485578 MRS2Q9HD23 443 aa18.56■□□□□ 0.56
PKDCC-207ENST00000485578 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
PKDCC-207ENST00000485578 CNTNAP4Q9C0A0 1308 aa18.55■□□□□ 0.56
PKDCC-207ENST00000485578 ZBTB1Q9Y2K1 713 aa18.55■□□□□ 0.56
PKDCC-207ENST00000485578 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
PKDCC-207ENST00000485578 CYP19A1P11511 503 aaPredicted RBP18.54■□□□□ 0.56
PKDCC-207ENST00000485578 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
PKDCC-207ENST00000485578 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
PKDCC-207ENST00000485578 APLP1P51693 650 aa18.53■□□□□ 0.56
PKDCC-207ENST00000485578 APAF1O14727 1248 aa18.52■□□□□ 0.56
PKDCC-207ENST00000485578 ARHGEF1Q92888 912 aaKnown RBP18.52■□□□□ 0.56
PKDCC-207ENST00000485578 CCDC87Q9NVE4 849 aa18.52■□□□□ 0.56
PKDCC-207ENST00000485578 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
PKDCC-207ENST00000485578 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
PKDCC-207ENST00000485578 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
PKDCC-207ENST00000485578 SCN7AQ01118 1682 aa18.51■□□□□ 0.55
PKDCC-207ENST00000485578 A1BGP04217 495 aa18.51■□□□□ 0.55
PKDCC-207ENST00000485578 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
PKDCC-207ENST00000485578 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
PKDCC-207ENST00000485578 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
PKDCC-207ENST00000485578 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
PKDCC-207ENST00000485578 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
PKDCC-207ENST00000485578 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
PKDCC-207ENST00000485578 RC3H1Q5TC82 1133 aaKnown RBP18.49■□□□□ 0.55
PKDCC-207ENST00000485578 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
PKDCC-207ENST00000485578 COL15A1P39059 1388 aa18.48■□□□□ 0.55
PKDCC-207ENST00000485578 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
PKDCC-207ENST00000485578 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
PKDCC-207ENST00000485578 KIAA1551Q9HCM1 1747 aa18.47■□□□□ 0.55
PKDCC-207ENST00000485578 KIF3CO14782 793 aa18.47■□□□□ 0.55
PKDCC-207ENST00000485578 TOMM70O94826 608 aa18.47■□□□□ 0.55
PKDCC-207ENST00000485578 C16orf71Q8IYS4 520 aaPredicted RBP18.47■□□□□ 0.55
PKDCC-207ENST00000485578 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
PKDCC-207ENST00000485578 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
PKDCC-207ENST00000485578 MMP10P09238 476 aa18.46■□□□□ 0.55
PKDCC-207ENST00000485578 GYS1P13807 737 aa18.46■□□□□ 0.55
PKDCC-207ENST00000485578 RFC4P35249 363 aa18.46■□□□□ 0.55
PKDCC-207ENST00000485578 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
PKDCC-207ENST00000485578 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
PKDCC-207ENST00000485578 TGFB2P61812 414 aa18.45■□□□□ 0.54
PKDCC-207ENST00000485578 FKBP8Q14318 412 aa18.45■□□□□ 0.54
PKDCC-207ENST00000485578 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
PKDCC-207ENST00000485578 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
PKDCC-207ENST00000485578 MIER1Q8N108 512 aa18.45■□□□□ 0.54
PKDCC-207ENST00000485578 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
PKDCC-207ENST00000485578 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
PKDCC-207ENST00000485578 USP42Q9H9J4 1324 aaKnown RBP18.44■□□□□ 0.54
PKDCC-207ENST00000485578 KIF13BQ9NQT8 1826 aa18.44■□□□□ 0.54
PKDCC-207ENST00000485578 ARHGAP27Q6ZUM4 889 aa18.43■□□□□ 0.54
PKDCC-207ENST00000485578 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
PKDCC-207ENST00000485578 NBPF26B4DH59 902 aa18.42■□□□□ 0.54
PKDCC-207ENST00000485578 STARD3NLO95772 234 aa18.42■□□□□ 0.54
PKDCC-207ENST00000485578 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
PKDCC-207ENST00000485578 NBPF10Q6P3W6 841 aaKnown RBP18.42■□□□□ 0.54
PKDCC-207ENST00000485578 NBPF15Q8N660 670 aa18.42■□□□□ 0.54
PKDCC-207ENST00000485578 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
PKDCC-207ENST00000485578 DDR1Q08345 913 aa18.41■□□□□ 0.54
PKDCC-207ENST00000485578 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
PKDCC-207ENST00000485578 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
PKDCC-207ENST00000485578 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
PKDCC-207ENST00000485578 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
PKDCC-207ENST00000485578 NUP98P52948 1817 aa18.4■□□□□ 0.54
PKDCC-207ENST00000485578 ANXA1P04083 346 aa18.4■□□□□ 0.54
PKDCC-207ENST00000485578 ADRA2BP18089 450 aa18.4■□□□□ 0.54
PKDCC-207ENST00000485578 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
PKDCC-207ENST00000485578 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
PKDCC-207ENST00000485578 CACNA1SQ13698 1873 aa18.39■□□□□ 0.54
PKDCC-207ENST00000485578 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.54
PKDCC-207ENST00000485578 A0A0G2JLW4 131 aa18.39■□□□□ 0.53
PKDCC-207ENST00000485578 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
PKDCC-207ENST00000485578 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
PKDCC-207ENST00000485578 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 ZPR1O75312 459 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 MYL6BP14649 208 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 CCDC24Q8N4L8 307 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
PKDCC-207ENST00000485578 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 KDM2BQ8NHM5 1336 aa18.37■□□□□ 0.53
PKDCC-207ENST00000485578 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
PKDCC-207ENST00000485578 COL11A2P13942 1736 aaPredicted RBP18.36■□□□□ 0.53
PKDCC-207ENST00000485578 C10orf71Q711Q0 1435 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms