RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 KCNQ3O43525 872 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
SDHB-207ENST00000485515 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
SDHB-207ENST00000485515 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SDHB-207ENST00000485515 BABAM1Q9NWV8 329 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 UBR2Q8IWV8 1755 aa16.55■□□□□ 0.24
SDHB-207ENST00000485515 TJP1Q07157 1748 aa16.54■□□□□ 0.24
SDHB-207ENST00000485515 A0A087WZG4 1122 aa16.54■□□□□ 0.24
SDHB-207ENST00000485515 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
SDHB-207ENST00000485515 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
SDHB-207ENST00000485515 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
SDHB-207ENST00000485515 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
SDHB-207ENST00000485515 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
SDHB-207ENST00000485515 APAF1O14727 1248 aa16.52■□□□□ 0.24
SDHB-207ENST00000485515 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
SDHB-207ENST00000485515 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
SDHB-207ENST00000485515 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
SDHB-207ENST00000485515 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
SDHB-207ENST00000485515 COL15A1P39059 1388 aa16.51■□□□□ 0.23
SDHB-207ENST00000485515 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
SDHB-207ENST00000485515 MMP10P09238 476 aa16.5■□□□□ 0.23
SDHB-207ENST00000485515 GYS1P13807 737 aa16.5■□□□□ 0.23
SDHB-207ENST00000485515 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
SDHB-207ENST00000485515 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
SDHB-207ENST00000485515 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
SDHB-207ENST00000485515 A1BGP04217 495 aa16.49■□□□□ 0.23
SDHB-207ENST00000485515 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
SDHB-207ENST00000485515 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
SDHB-207ENST00000485515 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
SDHB-207ENST00000485515 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
SDHB-207ENST00000485515 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
SDHB-207ENST00000485515 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
SDHB-207ENST00000485515 USPL1Q5W0Q7 1092 aa16.48■□□□□ 0.23
SDHB-207ENST00000485515 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
SDHB-207ENST00000485515 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
SDHB-207ENST00000485515 CHL1O00533 1208 aa16.46■□□□□ 0.23
SDHB-207ENST00000485515 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
SDHB-207ENST00000485515 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
SDHB-207ENST00000485515 GNAI1P63096 354 aa16.45■□□□□ 0.22
SDHB-207ENST00000485515 FKBP8Q14318 412 aa16.45■□□□□ 0.22
SDHB-207ENST00000485515 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
SDHB-207ENST00000485515 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SDHB-207ENST00000485515 GPR162Q16538 588 aa16.44■□□□□ 0.22
SDHB-207ENST00000485515 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
SDHB-207ENST00000485515 ZNF652Q9Y2D9 606 aa16.44■□□□□ 0.22
SDHB-207ENST00000485515 C4AP0C0L4 1744 aa16.44■□□□□ 0.22
SDHB-207ENST00000485515 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
SDHB-207ENST00000485515 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
SDHB-207ENST00000485515 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SDHB-207ENST00000485515 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
SDHB-207ENST00000485515 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
SDHB-207ENST00000485515 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
SDHB-207ENST00000485515 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
SDHB-207ENST00000485515 NPHP1O15259 732 aa16.41■□□□□ 0.22
SDHB-207ENST00000485515 TM4SF1P30408 202 aa16.41■□□□□ 0.22
SDHB-207ENST00000485515 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
SDHB-207ENST00000485515 NLGN2Q8NFZ4 835 aa16.41■□□□□ 0.22
SDHB-207ENST00000485515 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
SDHB-207ENST00000485515 MYL6BP14649 208 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 TGFB2P61812 414 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 NFIXQ14938 502 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 BICDL1Q6ZP65 573 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
SDHB-207ENST00000485515 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 POLRMTO00411 1230 aaKnown RBP16.39■□□□□ 0.21
SDHB-207ENST00000485515 RGL2O15211 777 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 HOXB7P09629 217 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
SDHB-207ENST00000485515 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
SDHB-207ENST00000485515 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 SERPINB2P05120 415 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 DDR1Q08345 913 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
SDHB-207ENST00000485515 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
SDHB-207ENST00000485515 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
SDHB-207ENST00000485515 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
SDHB-207ENST00000485515 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
SDHB-207ENST00000485515 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
SDHB-207ENST00000485515 CARMIL3Q8ND23 1372 aa16.37■□□□□ 0.21
SDHB-207ENST00000485515 SENP3-EIF4A1A0A087X0R7 540 aa16.36■□□□□ 0.21
SDHB-207ENST00000485515 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
SDHB-207ENST00000485515 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
SDHB-207ENST00000485515 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
SDHB-207ENST00000485515 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
SDHB-207ENST00000485515 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
SDHB-207ENST00000485515 IL16Q14005 1332 aa16.35■□□□□ 0.21
SDHB-207ENST00000485515 C10orf71Q711Q0 1435 aa16.35■□□□□ 0.21
SDHB-207ENST00000485515 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
SDHB-207ENST00000485515 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
SDHB-207ENST00000485515 DBF4Q9UBU7 674 aaPredicted RBP16.34■□□□□ 0.21
SDHB-207ENST00000485515 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms