RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
SNX17-206ENST00000484886 COL24A1Q17RW2 1714 aa25.17■■□□□ 1.62
SNX17-206ENST00000484886 PNISRQ8TF01 805 aaKnown RBP25.16■■□□□ 1.62
SNX17-206ENST00000484886 TEX13AQ9BXU3 409 aaPredicted RBP25.16■■□□□ 1.62
SNX17-206ENST00000484886 FHDC1Q9C0D6 1143 aaPredicted RBP25.16■■□□□ 1.62
SNX17-206ENST00000484886 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
SNX17-206ENST00000484886 ZBTB1Q9Y2K1 713 aa25.14■■□□□ 1.62
SNX17-206ENST00000484886 C4AP0C0L4 1744 aa25.14■■□□□ 1.61
SNX17-206ENST00000484886 SOS1Q07889 1333 aaPredicted RBP25.12■■□□□ 1.61
SNX17-206ENST00000484886 SNRPA1P09661 255 aaKnown RBP25.11■■□□□ 1.61
SNX17-206ENST00000484886 ZNF330Q9Y3S2 320 aaPredicted RBP25.11■■□□□ 1.61
SNX17-206ENST00000484886 COL15A1P39059 1388 aa25.1■■□□□ 1.61
SNX17-206ENST00000484886 SYT17Q9BSW7 474 aa25.1■■□□□ 1.61
SNX17-206ENST00000484886 SRP68Q9UHB9 627 aaKnown RBP25.1■■□□□ 1.61
SNX17-206ENST00000484886 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
SNX17-206ENST00000484886 KDM3BQ7LBC6 1761 aa25.1■■□□□ 1.61
SNX17-206ENST00000484886 APAF1O14727 1248 aa25.09■■□□□ 1.61
SNX17-206ENST00000484886 ZPR1O75312 459 aa25.09■■□□□ 1.61
SNX17-206ENST00000484886 PRAMEF22A3QJZ6 481 aa25.08■■□□□ 1.61
SNX17-206ENST00000484886 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
SNX17-206ENST00000484886 NLGN1Q8N2Q7 840 aa25.08■■□□□ 1.61
SNX17-206ENST00000484886 DCAF8L1A6NGE4 600 aa25.07■■□□□ 1.6
SNX17-206ENST00000484886 GYS1P13807 737 aa25.07■■□□□ 1.6
SNX17-206ENST00000484886 LAS1LQ9Y4W2 734 aaKnown RBP25.07■■□□□ 1.6
SNX17-206ENST00000484886 USP16Q9Y5T5 823 aa25.07■■□□□ 1.6
SNX17-206ENST00000484886 USP42Q9H9J4 1324 aaKnown RBP25.07■■□□□ 1.6
SNX17-206ENST00000484886 A1BGP04217 495 aa25.06■■□□□ 1.6
SNX17-206ENST00000484886 MMP10P09238 476 aa25.06■■□□□ 1.6
SNX17-206ENST00000484886 TRIM35Q9UPQ4 493 aa25.06■■□□□ 1.6
SNX17-206ENST00000484886 A0A087WZG4 1122 aa25.04■■□□□ 1.6
SNX17-206ENST00000484886 EIF4A1P60842 406 aaKnown RBP25.04■■□□□ 1.6
SNX17-206ENST00000484886 USPL1Q5W0Q7 1092 aa25.04■■□□□ 1.6
SNX17-206ENST00000484886 PIP4K2AP48426 406 aaPredicted RBP25.02■■□□□ 1.6
SNX17-206ENST00000484886 EIF5P55010 431 aaKnown RBP25.02■■□□□ 1.6
SNX17-206ENST00000484886 NARFQ9UHQ1 456 aa25.02■■□□□ 1.6
SNX17-206ENST00000484886 PARP3Q9Y6F1 533 aa25.02■■□□□ 1.6
SNX17-206ENST00000484886 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
SNX17-206ENST00000484886 SENP3-EIF4A1A0A087X0R7 540 aa25.01■■□□□ 1.59
SNX17-206ENST00000484886 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
SNX17-206ENST00000484886 FKBP8Q14318 412 aa25.01■■□□□ 1.59
SNX17-206ENST00000484886 BABAM1Q9NWV8 329 aa25.01■■□□□ 1.59
SNX17-206ENST00000484886 GIGYF1O75420 1035 aaPredicted RBP25■■□□□ 1.59
SNX17-206ENST00000484886 FAM9BQ8IZU0 186 aa24.99■■□□□ 1.59
SNX17-206ENST00000484886 NLGN2Q8NFZ4 835 aa24.99■■□□□ 1.59
SNX17-206ENST00000484886 CD2APQ9Y5K6 639 aa24.99■■□□□ 1.59
SNX17-206ENST00000484886 TBC1D2BQ9UPU7 963 aa24.98■■□□□ 1.59
SNX17-206ENST00000484886 CALD1Q05682 793 aaKnown RBP24.97■■□□□ 1.59
SNX17-206ENST00000484886 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
SNX17-206ENST00000484886 CHL1O00533 1208 aa24.95■■□□□ 1.58
SNX17-206ENST00000484886 DZIP3Q86Y13 1208 aaKnown RBP24.95■■□□□ 1.58
SNX17-206ENST00000484886 NBPF26B4DH59 902 aa24.94■■□□□ 1.58
SNX17-206ENST00000484886 NBPF10Q6P3W6 841 aaKnown RBP24.94■■□□□ 1.58
SNX17-206ENST00000484886 NBPF15Q8N660 670 aa24.94■■□□□ 1.58
SNX17-206ENST00000484886 SCN7AQ01118 1682 aa24.94■■□□□ 1.58
SNX17-206ENST00000484886 EIF2S2P20042 333 aaKnown RBP24.93■■□□□ 1.58
SNX17-206ENST00000484886 DDR1Q08345 913 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 GPR162Q16538 588 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 BICDL1Q6ZP65 573 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 NGEFQ8N5V2 710 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 CFAP44Q96MT7 982 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 BCL2L12Q9HB09 334 aa24.93■■□□□ 1.58
SNX17-206ENST00000484886 NFIXQ14938 502 aa24.92■■□□□ 1.58
SNX17-206ENST00000484886 MYL6BP14649 208 aa24.91■■□□□ 1.58
SNX17-206ENST00000484886 GNAI1P63096 354 aa24.91■■□□□ 1.58
SNX17-206ENST00000484886 POLRMTO00411 1230 aaKnown RBP24.9■■□□□ 1.58
SNX17-206ENST00000484886 CAMTA2O94983 1202 aa24.9■■□□□ 1.58
SNX17-206ENST00000484886 TM4SF1P30408 202 aa24.9■■□□□ 1.58
SNX17-206ENST00000484886 MBIPQ9NS73 344 aa24.9■■□□□ 1.58
SNX17-206ENST00000484886 IFT57Q9NWB7 429 aa24.9■■□□□ 1.58
SNX17-206ENST00000484886 SALL2Q9Y467 1007 aaPredicted RBP24.9■■□□□ 1.58
SNX17-206ENST00000484886 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
SNX17-206ENST00000484886 KRT24Q2M2I5 525 aa24.89■■□□□ 1.58
SNX17-206ENST00000484886 NECTIN2Q92692 538 aa24.89■■□□□ 1.58
SNX17-206ENST00000484886 BCORQ6W2J9 1755 aa24.89■■□□□ 1.57
SNX17-206ENST00000484886 TBC1D9BQ66K14 1250 aa24.88■■□□□ 1.57
SNX17-206ENST00000484886 ZNF652Q9Y2D9 606 aa24.88■■□□□ 1.57
SNX17-206ENST00000484886 WWC3Q9ULE0 1092 aa24.87■■□□□ 1.57
SNX17-206ENST00000484886 ERBB4Q15303 1308 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 KIF13BQ9NQT8 1826 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 SERPINB2P05120 415 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 CCDC27Q2M243 656 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 KIF6Q6ZMV9 814 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 WWC1Q8IX03 1113 aa24.86■■□□□ 1.57
SNX17-206ENST00000484886 NPHP1O15259 732 aa24.85■■□□□ 1.57
SNX17-206ENST00000484886 ZNF853P0CG23 659 aa24.85■■□□□ 1.57
SNX17-206ENST00000484886 AFDNP55196 1824 aaKnown RBP24.84■■□□□ 1.57
SNX17-206ENST00000484886 SETDB2Q96T68 719 aa24.84■■□□□ 1.57
SNX17-206ENST00000484886 CARMIL3Q8ND23 1372 aa24.83■■□□□ 1.57
SNX17-206ENST00000484886 N4BP2Q86UW6 1770 aaPredicted RBP24.83■■□□□ 1.57
SNX17-206ENST00000484886 TGFB2P61812 414 aa24.83■■□□□ 1.57
SNX17-206ENST00000484886 HDGFL1Q5TGJ6 251 aa24.83■■□□□ 1.57
SNX17-206ENST00000484886 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.57
SNX17-206ENST00000484886 PXDNLA1KZ92 1463 aa24.83■■□□□ 1.56
SNX17-206ENST00000484886 A0A0G2JLW4 131 aa24.82■■□□□ 1.56
SNX17-206ENST00000484886 ANXA1P04083 346 aa24.82■■□□□ 1.56
SNX17-206ENST00000484886 HOXB7P09629 217 aa24.82■■□□□ 1.56
SNX17-206ENST00000484886 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
SNX17-206ENST00000484886 CLEC4GQ6UXB4 293 aa24.82■■□□□ 1.56
SNX17-206ENST00000484886 ELL2O00472 640 aaPredicted RBP24.8■■□□□ 1.56
SNX17-206ENST00000484886 DPEP1P16444 411 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms