RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
SHANK1-208ENST00000483981 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
SHANK1-208ENST00000483981 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SHANK1-208ENST00000483981 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-208ENST00000483981 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
SHANK1-208ENST00000483981 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
SHANK1-208ENST00000483981 CHL1O00533 1208 aa16.14■□□□□ 0.17
SHANK1-208ENST00000483981 MSH5O43196 834 aa16.14■□□□□ 0.17
SHANK1-208ENST00000483981 STARD3NLO95772 234 aa16.14■□□□□ 0.17
SHANK1-208ENST00000483981 SNRPA1P09661 255 aaKnown RBP16.14■□□□□ 0.17
SHANK1-208ENST00000483981 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
SHANK1-208ENST00000483981 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-208ENST00000483981 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
SHANK1-208ENST00000483981 A1BGP04217 495 aa16.12■□□□□ 0.17
SHANK1-208ENST00000483981 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
SHANK1-208ENST00000483981 GYS1P13807 737 aa16.12■□□□□ 0.17
SHANK1-208ENST00000483981 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
SHANK1-208ENST00000483981 ARXQ96QS3 562 aa16.12■□□□□ 0.17
SHANK1-208ENST00000483981 CANXP27824 592 aaKnown RBP16.11■□□□□ 0.17
SHANK1-208ENST00000483981 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
SHANK1-208ENST00000483981 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
SHANK1-208ENST00000483981 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
SHANK1-208ENST00000483981 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
SHANK1-208ENST00000483981 RFC4P35249 363 aa16.1■□□□□ 0.17
SHANK1-208ENST00000483981 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
SHANK1-208ENST00000483981 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
SHANK1-208ENST00000483981 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
SHANK1-208ENST00000483981 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
SHANK1-208ENST00000483981 COL15A1P39059 1388 aa16.1■□□□□ 0.17
SHANK1-208ENST00000483981 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
SHANK1-208ENST00000483981 POLD1P28340 1107 aa16.09■□□□□ 0.17
SHANK1-208ENST00000483981 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-208ENST00000483981 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
SHANK1-208ENST00000483981 FHDC1Q9C0D6 1143 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-208ENST00000483981 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
SHANK1-208ENST00000483981 NARFQ9UHQ1 456 aa16.09■□□□□ 0.17
SHANK1-208ENST00000483981 CCER2I3L3R5 266 aa16.08■□□□□ 0.16
SHANK1-208ENST00000483981 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
SHANK1-208ENST00000483981 NLGN1Q8N2Q7 840 aa16.08■□□□□ 0.16
SHANK1-208ENST00000483981 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
SHANK1-208ENST00000483981 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
SHANK1-208ENST00000483981 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-208ENST00000483981 FKBP8Q14318 412 aa16.07■□□□□ 0.16
SHANK1-208ENST00000483981 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
SHANK1-208ENST00000483981 TM4SF1P30408 202 aa16.06■□□□□ 0.16
SHANK1-208ENST00000483981 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
SHANK1-208ENST00000483981 USPL1Q5W0Q7 1092 aa16.06■□□□□ 0.16
SHANK1-208ENST00000483981 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
SHANK1-208ENST00000483981 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
SHANK1-208ENST00000483981 MMP10P09238 476 aa16.05■□□□□ 0.16
SHANK1-208ENST00000483981 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
SHANK1-208ENST00000483981 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
SHANK1-208ENST00000483981 A0A087WZG4 1122 aa16.04■□□□□ 0.16
SHANK1-208ENST00000483981 ZPR1O75312 459 aa16.04■□□□□ 0.16
SHANK1-208ENST00000483981 PDIA6Q15084 440 aa16.04■□□□□ 0.16
SHANK1-208ENST00000483981 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
SHANK1-208ENST00000483981 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
SHANK1-208ENST00000483981 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
SHANK1-208ENST00000483981 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
SHANK1-208ENST00000483981 GNAI1P63096 354 aa16.03■□□□□ 0.16
SHANK1-208ENST00000483981 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
SHANK1-208ENST00000483981 DDR1Q08345 913 aa16.03■□□□□ 0.16
SHANK1-208ENST00000483981 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
SHANK1-208ENST00000483981 MIER1Q8N108 512 aa16.02■□□□□ 0.16
SHANK1-208ENST00000483981 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
SHANK1-208ENST00000483981 BCORQ6W2J9 1755 aa16.02■□□□□ 0.15
SHANK1-208ENST00000483981 KIF13BQ9NQT8 1826 aa16.01■□□□□ 0.15
SHANK1-208ENST00000483981 IL16Q14005 1332 aa16.01■□□□□ 0.15
SHANK1-208ENST00000483981 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
SHANK1-208ENST00000483981 NFIXQ14938 502 aa16.01■□□□□ 0.15
SHANK1-208ENST00000483981 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
SHANK1-208ENST00000483981 NRXN2Q9P2S2 1712 aa16■□□□□ 0.15
SHANK1-208ENST00000483981 HOXB7P09629 217 aa16■□□□□ 0.15
SHANK1-208ENST00000483981 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
SHANK1-208ENST00000483981 WDR63Q8IWG1 891 aa16■□□□□ 0.15
SHANK1-208ENST00000483981 NGEFQ8N5V2 710 aa16■□□□□ 0.15
SHANK1-208ENST00000483981 ZNF330Q9Y3S2 320 aaPredicted RBP16■□□□□ 0.15
SHANK1-208ENST00000483981 ZNF521Q96K83 1311 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 RGL2O15211 777 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 PROSER3Q2NL68 480 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 TBC1D9BQ66K14 1250 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
SHANK1-208ENST00000483981 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
SHANK1-208ENST00000483981 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-208ENST00000483981 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
SHANK1-208ENST00000483981 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
SHANK1-208ENST00000483981 AFDNP55196 1824 aaKnown RBP15.97■□□□□ 0.15
SHANK1-208ENST00000483981 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
SHANK1-208ENST00000483981 TTLL7Q6ZT98 887 aa15.97■□□□□ 0.15
SHANK1-208ENST00000483981 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
SHANK1-208ENST00000483981 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 ANXA1P04083 346 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 MYL6BP14649 208 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 HLFQ16534 295 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
SHANK1-208ENST00000483981 DDX21Q9NR30 783 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms