RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 FSD2A1L4K1 749 aa13.58□□□□□ -0.23
EWSR1-217ENST00000483415 VAMP4O75379 141 aa13.58□□□□□ -0.23
EWSR1-217ENST00000483415 MCM10Q7L590 875 aa13.58□□□□□ -0.23
EWSR1-217ENST00000483415 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.23
EWSR1-217ENST00000483415 PTPRCP08575 1304 aa13.58□□□□□ -0.24
EWSR1-217ENST00000483415 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
EWSR1-217ENST00000483415 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
EWSR1-217ENST00000483415 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.24
EWSR1-217ENST00000483415 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.24
EWSR1-217ENST00000483415 RARSP54136 660 aaKnown RBP13.58□□□□□ -0.24
EWSR1-217ENST00000483415 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
EWSR1-217ENST00000483415 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
EWSR1-217ENST00000483415 CABP4P57796 275 aa13.56□□□□□ -0.24
EWSR1-217ENST00000483415 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
EWSR1-217ENST00000483415 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
EWSR1-217ENST00000483415 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
EWSR1-217ENST00000483415 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
EWSR1-217ENST00000483415 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
EWSR1-217ENST00000483415 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
EWSR1-217ENST00000483415 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
EWSR1-217ENST00000483415 QTRT2Q9H974 415 aaKnown RBP13.56□□□□□ -0.24
EWSR1-217ENST00000483415 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
EWSR1-217ENST00000483415 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
EWSR1-217ENST00000483415 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
EWSR1-217ENST00000483415 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
EWSR1-217ENST00000483415 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
EWSR1-217ENST00000483415 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
EWSR1-217ENST00000483415 CHMP4BQ9H444 224 aaKnown RBP13.55□□□□□ -0.24
EWSR1-217ENST00000483415 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
EWSR1-217ENST00000483415 TMOD3Q9NYL9 352 aa13.54□□□□□ -0.24
EWSR1-217ENST00000483415 LAMB2P55268 1798 aa13.54□□□□□ -0.24
EWSR1-217ENST00000483415 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
EWSR1-217ENST00000483415 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.24
EWSR1-217ENST00000483415 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.24
EWSR1-217ENST00000483415 DCTN1Q14203 1278 aa13.52□□□□□ -0.24
EWSR1-217ENST00000483415 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.24
EWSR1-217ENST00000483415 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.24
EWSR1-217ENST00000483415 PLIN1O60240 522 aa13.52□□□□□ -0.25
EWSR1-217ENST00000483415 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
EWSR1-217ENST00000483415 PANK2Q9BZ23 570 aa13.51□□□□□ -0.25
EWSR1-217ENST00000483415 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
EWSR1-217ENST00000483415 COL24A1Q17RW2 1714 aa13.51□□□□□ -0.25
EWSR1-217ENST00000483415 TSR2Q969E8 191 aaKnown RBP13.51□□□□□ -0.25
EWSR1-217ENST00000483415 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
EWSR1-217ENST00000483415 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
EWSR1-217ENST00000483415 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
EWSR1-217ENST00000483415 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
EWSR1-217ENST00000483415 C4BP0C0L5 1744 aa13.5□□□□□ -0.25
EWSR1-217ENST00000483415 ABCC4O15439 1325 aa13.5□□□□□ -0.25
EWSR1-217ENST00000483415 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
EWSR1-217ENST00000483415 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
EWSR1-217ENST00000483415 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
EWSR1-217ENST00000483415 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
EWSR1-217ENST00000483415 RXRBP28702 533 aa13.5□□□□□ -0.25
EWSR1-217ENST00000483415 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
EWSR1-217ENST00000483415 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
EWSR1-217ENST00000483415 HYPKQ9NX55 129 aa13.49□□□□□ -0.25
EWSR1-217ENST00000483415 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
EWSR1-217ENST00000483415 COL15A1P39059 1388 aa13.49□□□□□ -0.25
EWSR1-217ENST00000483415 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
EWSR1-217ENST00000483415 DBF4Q9UBU7 674 aaPredicted RBP13.49□□□□□ -0.25
EWSR1-217ENST00000483415 PIGBQ92521 554 aa13.49□□□□□ -0.25
EWSR1-217ENST00000483415 FGD1P98174 961 aa13.48□□□□□ -0.25
EWSR1-217ENST00000483415 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
EWSR1-217ENST00000483415 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
EWSR1-217ENST00000483415 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
EWSR1-217ENST00000483415 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
EWSR1-217ENST00000483415 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
EWSR1-217ENST00000483415 C4AP0C0L4 1744 aa13.48□□□□□ -0.25
EWSR1-217ENST00000483415 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 TPM2P07951 284 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
EWSR1-217ENST00000483415 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 GOLGA6L3A6NEY3 463 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 NUP98P52948 1817 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
EWSR1-217ENST00000483415 RGS17Q9UGC6 210 aaPredicted RBP13.47□□□□□ -0.25
EWSR1-217ENST00000483415 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
EWSR1-217ENST00000483415 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
EWSR1-217ENST00000483415 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
EWSR1-217ENST00000483415 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
EWSR1-217ENST00000483415 SMC4Q9NTJ3 1288 aa13.45□□□□□ -0.26
EWSR1-217ENST00000483415 INTS3Q68E01 1043 aaKnown RBP13.45□□□□□ -0.26
EWSR1-217ENST00000483415 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
EWSR1-217ENST00000483415 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
EWSR1-217ENST00000483415 ESPNB1AK53 854 aa13.44□□□□□ -0.26
EWSR1-217ENST00000483415 PLSCR1O15162 318 aa13.44□□□□□ -0.26
EWSR1-217ENST00000483415 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
EWSR1-217ENST00000483415 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
EWSR1-217ENST00000483415 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
EWSR1-217ENST00000483415 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
EWSR1-217ENST00000483415 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
EWSR1-217ENST00000483415 STARD3NLO95772 234 aa13.43□□□□□ -0.26
EWSR1-217ENST00000483415 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
EWSR1-217ENST00000483415 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
EWSR1-217ENST00000483415 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
EWSR1-217ENST00000483415 PDIA6Q15084 440 aa13.42□□□□□ -0.26
EWSR1-217ENST00000483415 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
EWSR1-217ENST00000483415 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
EWSR1-217ENST00000483415 RGS3P49796 1198 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms