RNA–Protein interactions for RNA: ENST00000482935.5

DNMT3A-212, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-212ENST00000482935 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 UBR2Q8IWV8 1755 aa10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 INTS5Q6P9B9 1019 aaKnown RBP10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
DNMT3A-212ENST00000482935 APAF1O14727 1248 aa10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 SNRPA1P09661 255 aaKnown RBP10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 CANXP27824 592 aaKnown RBP10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 NPM2Q86SE8 214 aaKnown RBP10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 TSPYL4Q9UJ04 414 aa10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 ZBTB1Q9Y2K1 713 aa10.85□□□□□ -0.67
DNMT3A-212ENST00000482935 ZPR1O75312 459 aa10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 SOS1Q07889 1333 aaPredicted RBP10.84□□□□□ -0.67
DNMT3A-212ENST00000482935 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
DNMT3A-212ENST00000482935 COL15A1P39059 1388 aa10.83□□□□□ -0.68
DNMT3A-212ENST00000482935 NLGN1Q8N2Q7 840 aa10.83□□□□□ -0.68
DNMT3A-212ENST00000482935 BABAM1Q9NWV8 329 aa10.83□□□□□ -0.68
DNMT3A-212ENST00000482935 LAS1LQ9Y4W2 734 aaKnown RBP10.83□□□□□ -0.68
DNMT3A-212ENST00000482935 A0A087WZG4 1122 aa10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 EIF4A1P60842 406 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 CALD1Q05682 793 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 SRP68Q9UHB9 627 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-212ENST00000482935 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 GIGYF1O75420 1035 aaPredicted RBP10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 A1BGP04217 495 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 MMP10P09238 476 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 GYS1P13807 737 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 IL6STP40189 918 aaPredicted RBP10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 EIF5P55010 431 aaKnown RBP10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 SYT17Q9BSW7 474 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 USP16Q9Y5T5 823 aa10.81□□□□□ -0.68
DNMT3A-212ENST00000482935 KDM3BQ7LBC6 1761 aa10.8□□□□□ -0.68
DNMT3A-212ENST00000482935 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
DNMT3A-212ENST00000482935 USPL1Q5W0Q7 1092 aa10.8□□□□□ -0.68
DNMT3A-212ENST00000482935 NARFQ9UHQ1 456 aa10.8□□□□□ -0.68
DNMT3A-212ENST00000482935 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
DNMT3A-212ENST00000482935 CHL1O00533 1208 aa10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 FKBP8Q14318 412 aa10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 PARP3Q9Y6F1 533 aa10.79□□□□□ -0.68
DNMT3A-212ENST00000482935 C4AP0C0L4 1744 aa10.78□□□□□ -0.68
DNMT3A-212ENST00000482935 GNAI1P63096 354 aa10.78□□□□□ -0.68
DNMT3A-212ENST00000482935 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
DNMT3A-212ENST00000482935 CD2APQ9Y5K6 639 aa10.78□□□□□ -0.68
DNMT3A-212ENST00000482935 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 EIF2S2P20042 333 aaKnown RBP10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 NBPF15Q8N660 670 aa10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 MBIPQ9NS73 344 aa10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
DNMT3A-212ENST00000482935 LAMB4A4D0S4 1761 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 BICDL1Q6ZP65 573 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 NLGN2Q8NFZ4 835 aa10.76□□□□□ -0.69
DNMT3A-212ENST00000482935 CAMTA2O94983 1202 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 ZNF853P0CG23 659 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 MYL6BP14649 208 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 DDR1Q08345 913 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 NFIXQ14938 502 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 KRT24Q2M2I5 525 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 KIF6Q6ZMV9 814 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 ZNF652Q9Y2D9 606 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 ERBB4Q15303 1308 aa10.75□□□□□ -0.69
DNMT3A-212ENST00000482935 POLRMTO00411 1230 aaKnown RBP10.74□□□□□ -0.69
DNMT3A-212ENST00000482935 HOXB7P09629 217 aa10.74□□□□□ -0.69
DNMT3A-212ENST00000482935 TM4SF1P30408 202 aa10.74□□□□□ -0.69
DNMT3A-212ENST00000482935 GPR162Q16538 588 aa10.74□□□□□ -0.69
DNMT3A-212ENST00000482935 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
DNMT3A-212ENST00000482935 NPHP1O15259 732 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 SETDB2Q96T68 719 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 C10orf71Q711Q0 1435 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 SCN7AQ01118 1682 aa10.73□□□□□ -0.69
DNMT3A-212ENST00000482935 ELL2O00472 640 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 SERPINB2P05120 415 aa10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 PROSER3Q2NL68 480 aa10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 CLEC4GQ6UXB4 293 aa10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 WDR63Q8IWG1 891 aa10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 IL16Q14005 1332 aa10.72□□□□□ -0.69
DNMT3A-212ENST00000482935 CARMIL3Q8ND23 1372 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms