RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TJP1Q07157 1748 aa27.33■■□□□ 1.96
SEC13-217ENST00000482647 CHL1O00533 1208 aa27.32■■□□□ 1.96
SEC13-217ENST00000482647 RFC4P35249 363 aa27.32■■□□□ 1.96
SEC13-217ENST00000482647 NCBP3Q53F19 620 aaKnown RBP27.32■■□□□ 1.96
SEC13-217ENST00000482647 COL5A3P25940 1745 aaPredicted RBP27.32■■□□□ 1.96
SEC13-217ENST00000482647 PTGER2P43116 358 aa27.31■■□□□ 1.96
SEC13-217ENST00000482647 CCDC27Q2M243 656 aa27.31■■□□□ 1.96
SEC13-217ENST00000482647 CANXP27824 592 aaKnown RBP27.3■■□□□ 1.96
SEC13-217ENST00000482647 CFAP44Q96MT7 982 aa27.3■■□□□ 1.96
SEC13-217ENST00000482647 PPP1R1BQ9UD71 204 aaPredicted RBP27.3■■□□□ 1.96
SEC13-217ENST00000482647 ZBTB1Q9Y2K1 713 aa27.3■■□□□ 1.96
SEC13-217ENST00000482647 USP16Q9Y5T5 823 aa27.3■■□□□ 1.96
SEC13-217ENST00000482647 PRAMEF22A3QJZ6 481 aa27.29■■□□□ 1.96
SEC13-217ENST00000482647 GIGYF1O75420 1035 aaPredicted RBP27.29■■□□□ 1.96
SEC13-217ENST00000482647 POLD1P28340 1107 aa27.29■■□□□ 1.96
SEC13-217ENST00000482647 LRP5O75197 1615 aa27.29■■□□□ 1.96
SEC13-217ENST00000482647 TUBGCP6Q96RT7 1819 aa27.29■■□□□ 1.96
SEC13-217ENST00000482647 UBR3Q6ZT12 1888 aa27.28■■□□□ 1.96
SEC13-217ENST00000482647 SOS1Q07889 1333 aaPredicted RBP27.28■■□□□ 1.96
SEC13-217ENST00000482647 SENP3-EIF4A1A0A087X0R7 540 aa27.28■■□□□ 1.96
SEC13-217ENST00000482647 MIER1Q8N108 512 aa27.28■■□□□ 1.96
SEC13-217ENST00000482647 SGIP1Q9BQI5 828 aa27.28■■□□□ 1.96
SEC13-217ENST00000482647 A1BGP04217 495 aa27.27■■□□□ 1.96
SEC13-217ENST00000482647 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
SEC13-217ENST00000482647 GNAI1P63096 354 aa27.26■■□□□ 1.95
SEC13-217ENST00000482647 WWC1Q8IX03 1113 aa27.26■■□□□ 1.95
SEC13-217ENST00000482647 IFT57Q9NWB7 429 aa27.26■■□□□ 1.95
SEC13-217ENST00000482647 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
SEC13-217ENST00000482647 IL6STP40189 918 aaPredicted RBP27.25■■□□□ 1.95
SEC13-217ENST00000482647 EIF5P55010 431 aaKnown RBP27.25■■□□□ 1.95
SEC13-217ENST00000482647 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
SEC13-217ENST00000482647 A0A087WZG4 1122 aa27.24■■□□□ 1.95
SEC13-217ENST00000482647 ZNF853P0CG23 659 aa27.24■■□□□ 1.95
SEC13-217ENST00000482647 NGEFQ8N5V2 710 aa27.24■■□□□ 1.95
SEC13-217ENST00000482647 ARXQ96QS3 562 aa27.24■■□□□ 1.95
SEC13-217ENST00000482647 ZPR1O75312 459 aa27.23■■□□□ 1.95
SEC13-217ENST00000482647 NLGN1Q8N2Q7 840 aa27.23■■□□□ 1.95
SEC13-217ENST00000482647 SALL2Q9Y467 1007 aaPredicted RBP27.23■■□□□ 1.95
SEC13-217ENST00000482647 KDM3BQ7LBC6 1761 aa27.22■■□□□ 1.95
SEC13-217ENST00000482647 MBIPQ9NS73 344 aa27.22■■□□□ 1.95
SEC13-217ENST00000482647 COL15A1P39059 1388 aa27.22■■□□□ 1.95
SEC13-217ENST00000482647 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
SEC13-217ENST00000482647 USP42Q9H9J4 1324 aaKnown RBP27.2■■□□□ 1.95
SEC13-217ENST00000482647 GYS1P13807 737 aa27.2■■□□□ 1.94
SEC13-217ENST00000482647 SRP68Q9UHB9 627 aaKnown RBP27.2■■□□□ 1.94
SEC13-217ENST00000482647 NARFQ9UHQ1 456 aa27.2■■□□□ 1.94
SEC13-217ENST00000482647 WDR63Q8IWG1 891 aa27.18■■□□□ 1.94
SEC13-217ENST00000482647 IL16Q14005 1332 aa27.17■■□□□ 1.94
SEC13-217ENST00000482647 NBPF26B4DH59 902 aa27.17■■□□□ 1.94
SEC13-217ENST00000482647 PIP4K2AP48426 406 aaPredicted RBP27.17■■□□□ 1.94
SEC13-217ENST00000482647 USPL1Q5W0Q7 1092 aa27.17■■□□□ 1.94
SEC13-217ENST00000482647 NBPF10Q6P3W6 841 aaKnown RBP27.17■■□□□ 1.94
SEC13-217ENST00000482647 NBPF15Q8N660 670 aa27.17■■□□□ 1.94
SEC13-217ENST00000482647 EIF2S2P20042 333 aaKnown RBP27.15■■□□□ 1.94
SEC13-217ENST00000482647 KRT24Q2M2I5 525 aa27.15■■□□□ 1.94
SEC13-217ENST00000482647 TBC1D2BQ9UPU7 963 aa27.15■■□□□ 1.94
SEC13-217ENST00000482647 MMP10P09238 476 aa27.14■■□□□ 1.94
SEC13-217ENST00000482647 HOXB7P09629 217 aa27.14■■□□□ 1.94
SEC13-217ENST00000482647 FKBP8Q14318 412 aa27.14■■□□□ 1.94
SEC13-217ENST00000482647 ERBB4Q15303 1308 aa27.14■■□□□ 1.93
SEC13-217ENST00000482647 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
SEC13-217ENST00000482647 DUSP27Q5VZP5 1158 aa27.12■■□□□ 1.93
SEC13-217ENST00000482647 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
SEC13-217ENST00000482647 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
SEC13-217ENST00000482647 MYL6BP14649 208 aa27.1■■□□□ 1.93
SEC13-217ENST00000482647 TSR2Q969E8 191 aaKnown RBP27.1■■□□□ 1.93
SEC13-217ENST00000482647 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
SEC13-217ENST00000482647 SYT17Q9BSW7 474 aa27.09■■□□□ 1.93
SEC13-217ENST00000482647 BCL2L12Q9HB09 334 aa27.09■■□□□ 1.93
SEC13-217ENST00000482647 PARP3Q9Y6F1 533 aa27.09■■□□□ 1.93
SEC13-217ENST00000482647 TM4SF1P30408 202 aa27.08■■□□□ 1.93
SEC13-217ENST00000482647 HDGFL1Q5TGJ6 251 aa27.08■■□□□ 1.93
SEC13-217ENST00000482647 NECTIN2Q92692 538 aa27.08■■□□□ 1.93
SEC13-217ENST00000482647 C4AP0C0L4 1744 aa27.07■■□□□ 1.92
SEC13-217ENST00000482647 CAMTA2O94983 1202 aa27.07■■□□□ 1.92
SEC13-217ENST00000482647 C8orf58Q8NAV2 365 aa27.07■■□□□ 1.92
SEC13-217ENST00000482647 CHMP4AQ9BY43 222 aa27.07■■□□□ 1.92
SEC13-217ENST00000482647 ELL2O00472 640 aaPredicted RBP27.06■■□□□ 1.92
SEC13-217ENST00000482647 PDIA6Q15084 440 aa27.06■■□□□ 1.92
SEC13-217ENST00000482647 CD2APQ9Y5K6 639 aa27.06■■□□□ 1.92
SEC13-217ENST00000482647 LAMB4A4D0S4 1761 aa27.06■■□□□ 1.92
SEC13-217ENST00000482647 NFIXQ14938 502 aa27.05■■□□□ 1.92
SEC13-217ENST00000482647 MYH16Q9H6N6 1097 aa27.05■■□□□ 1.92
SEC13-217ENST00000482647 DDX21Q9NR30 783 aaKnown RBP eCLIP27.05■■□□□ 1.92
SEC13-217ENST00000482647 ZNF652Q9Y2D9 606 aa27.05■■□□□ 1.92
SEC13-217ENST00000482647 RGL2O15211 777 aa27.04■■□□□ 1.92
SEC13-217ENST00000482647 GOLGA2Q08379 1002 aa27.04■■□□□ 1.92
SEC13-217ENST00000482647 CLEC4GQ6UXB4 293 aa27.04■■□□□ 1.92
SEC13-217ENST00000482647 KIF6Q6ZMV9 814 aa27.04■■□□□ 1.92
SEC13-217ENST00000482647 DBF4Q9UBU7 674 aaPredicted RBP27.04■■□□□ 1.92
SEC13-217ENST00000482647 ZNF521Q96K83 1311 aa27.04■■□□□ 1.92
SEC13-217ENST00000482647 DDR1Q08345 913 aa27.03■■□□□ 1.92
SEC13-217ENST00000482647 FANCIQ9NVI1 1328 aa27.03■■□□□ 1.92
SEC13-217ENST00000482647 POLRMTO00411 1230 aaKnown RBP27.02■■□□□ 1.92
SEC13-217ENST00000482647 PROSER3Q2NL68 480 aa27.02■■□□□ 1.92
SEC13-217ENST00000482647 BICDL1Q6ZP65 573 aa27.02■■□□□ 1.92
SEC13-217ENST00000482647 CHPF2Q9P2E5 772 aa27.02■■□□□ 1.92
SEC13-217ENST00000482647 ERVV-1B6SEH8 477 aa27.01■■□□□ 1.91
SEC13-217ENST00000482647 ANXA1P04083 346 aa27.01■■□□□ 1.91
SEC13-217ENST00000482647 TBC1D9BQ66K14 1250 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms