RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 PNMA1Q8ND90 353 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 FAM117AQ9C073 453 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 STRN4Q9NRL3 753 aa5.11□□□□□ -1.59
USH2A-204ENST00000481786 PRKCSHP14314 528 aaPredicted RBP5.1□□□□□ -1.59
USH2A-204ENST00000481786 ATP4AP20648 1035 aa5.1□□□□□ -1.59
USH2A-204ENST00000481786 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
USH2A-204ENST00000481786 KHNYNO15037 678 aaKnown RBP5.09□□□□□ -1.59
USH2A-204ENST00000481786 ATXN7O15265 892 aaPredicted RBP5.09□□□□□ -1.59
USH2A-204ENST00000481786 APBA3O96018 575 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 PLA2G4AP47712 749 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 BRPF1P55201 1214 aaPredicted RBP5.09□□□□□ -1.59
USH2A-204ENST00000481786 NEUROD2Q15784 382 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 RNF20Q5VTR2 975 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 RHBDD1Q8TEB9 315 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 TRIM52Q96A61 297 aa5.09□□□□□ -1.59
USH2A-204ENST00000481786 TSGA10IPQ3SY00 556 aa5.08□□□□□ -1.6
USH2A-204ENST00000481786 SH3D19Q5HYK7 790 aa5.08□□□□□ -1.6
USH2A-204ENST00000481786 PPARGC1BQ86YN6 1023 aaKnown RBP5.08□□□□□ -1.6
USH2A-204ENST00000481786 DDRGK1Q96HY6 314 aa5.08□□□□□ -1.6
USH2A-204ENST00000481786 CCDC85AQ96PX6 553 aaPredicted RBP5.08□□□□□ -1.6
USH2A-204ENST00000481786 ESF1Q9H501 851 aaKnown RBP5.08□□□□□ -1.6
USH2A-204ENST00000481786 ETNK1Q9HBU6 452 aa5.08□□□□□ -1.6
USH2A-204ENST00000481786 RFC5P40937 340 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 PRRT3Q5FWE3 981 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 FIGNL1Q6PIW4 674 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 AIDAQ96BJ3 306 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 GJD4Q96KN9 370 aaPredicted RBP5.07□□□□□ -1.6
USH2A-204ENST00000481786 MDFIQ99750 246 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 STARD13Q9Y3M8 1113 aa5.07□□□□□ -1.6
USH2A-204ENST00000481786 A0A1W2PNR3 127 aa5.06□□□□□ -1.6
USH2A-204ENST00000481786 GTF2E1P29083 439 aaPredicted RBP5.06□□□□□ -1.6
USH2A-204ENST00000481786 FAM182BQ5T319 152 aa5.06□□□□□ -1.6
USH2A-204ENST00000481786 ZNF468Q5VIY5 522 aaPredicted RBP5.06□□□□□ -1.6
USH2A-204ENST00000481786 CCDC125Q86Z20 511 aa5.06□□□□□ -1.6
USH2A-204ENST00000481786 ELOA3CA0A087WX78 387 aaPredicted RBP5.05□□□□□ -1.6
USH2A-204ENST00000481786 ELOA3DA6NLF2 546 aaPredicted RBP5.05□□□□□ -1.6
USH2A-204ENST00000481786 M0R082 166 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 TLR1Q15399 786 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 ELOA3BQ3SY89 546 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 MCTP1Q6DN14 999 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 TBC1D9Q6ZT07 1266 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 NLRP8Q86W28 1048 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 ELOA3Q8NG57 546 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 ZNF417Q8TAU3 575 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 ZNF587Q96SQ5 575 aaPredicted RBP5.05□□□□□ -1.6
USH2A-204ENST00000481786 PRR12Q9ULL5 1215 aa5.05□□□□□ -1.6
USH2A-204ENST00000481786 COBLO75128 1261 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 ALBP02768 609 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 H2AFB1P0C5Y9 115 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 H2AFB2P0C5Z0 115 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 ARSJQ5FYB0 599 aaPredicted RBP5.04□□□□□ -1.6
USH2A-204ENST00000481786 SYT9Q86SS6 491 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 IL27Q8NEV9 243 aa5.04□□□□□ -1.6
USH2A-204ENST00000481786 AVENQ9NQS1 362 aaPredicted RBP5.04□□□□□ -1.6
USH2A-204ENST00000481786 ABCC9O60706 1549 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 NISCHQ9Y2I1 1504 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 GPR37L1O60883 481 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 SELPP16109 830 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 NR1H3Q13133 447 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 TRIM28Q13263 835 aaKnown RBP5.03□□□□□ -1.6
USH2A-204ENST00000481786 MBTPS1Q14703 1052 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 SHISA2Q6UWI4 295 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 USP3Q9Y6I4 520 aa5.03□□□□□ -1.6
USH2A-204ENST00000481786 SPDYE3A6NKU9 549 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 MYCP01106 439 aaPredicted RBP5.02□□□□□ -1.61
USH2A-204ENST00000481786 NID1P14543 1247 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 ADGRE1Q14246 886 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 MICALL1Q8N3F8 863 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 ZIC5Q96T25 663 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 GOPCQ9HD26 462 aa5.02□□□□□ -1.61
USH2A-204ENST00000481786 ALAS2P22557 587 aa5.01□□□□□ -1.61
USH2A-204ENST00000481786 NRG1Q02297 640 aaPredicted RBP5.01□□□□□ -1.61
USH2A-204ENST00000481786 ESCO1Q5FWF5 840 aa5.01□□□□□ -1.61
USH2A-204ENST00000481786 TP53INP1Q96A56 240 aa5.01□□□□□ -1.61
USH2A-204ENST00000481786 MARK1Q9P0L2 795 aa5.01□□□□□ -1.61
USH2A-204ENST00000481786 EFSO43281 561 aa5□□□□□ -1.61
USH2A-204ENST00000481786 FAM157BP0CG42 384 aa5□□□□□ -1.61
USH2A-204ENST00000481786 SCNN1DP51172 638 aa5□□□□□ -1.61
USH2A-204ENST00000481786 RAB44Q7Z6P3 723 aaPredicted RBP5□□□□□ -1.61
USH2A-204ENST00000481786 ZNF295-AS1Q8N0V1 137 aa5□□□□□ -1.61
USH2A-204ENST00000481786 NACC1Q96RE7 527 aa5□□□□□ -1.61
USH2A-204ENST00000481786 SLC30A3Q99726 388 aa5□□□□□ -1.61
USH2A-204ENST00000481786 CEP126Q9P2H0 1117 aa5□□□□□ -1.61
USH2A-204ENST00000481786 PARP3Q9Y6F1 533 aa5□□□□□ -1.61
USH2A-204ENST00000481786 C1orf216Q8TAB5 229 aa4.99□□□□□ -1.61
USH2A-204ENST00000481786 SSBP4Q9BWG4 385 aaPredicted RBP4.99□□□□□ -1.61
USH2A-204ENST00000481786 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
USH2A-204ENST00000481786 COL17A1Q9UMD9 1497 aaPredicted RBP4.99□□□□□ -1.61
USH2A-204ENST00000481786 C9orf172C9J069 976 aa4.98□□□□□ -1.61
USH2A-204ENST00000481786 ELNP15502 786 aa4.98□□□□□ -1.61
USH2A-204ENST00000481786 MCCD1P59942 119 aaPredicted RBP4.98□□□□□ -1.61
USH2A-204ENST00000481786 TRAPPC3LQ5T215 181 aa4.98□□□□□ -1.61
USH2A-204ENST00000481786 C20orf204Q6ZNR8 217 aa4.98□□□□□ -1.61
USH2A-204ENST00000481786 TXNRD3Q86VQ6 643 aa4.98□□□□□ -1.61
USH2A-204ENST00000481786 PCMTD1Q96MG8 357 aaPredicted RBP4.98□□□□□ -1.61
USH2A-204ENST00000481786 NIFKQ9BYG3 293 aaKnown RBP4.98□□□□□ -1.61
USH2A-204ENST00000481786 A0A0A0MRY4 1105 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 INHAP05111 366 aa4.97□□□□□ -1.61
USH2A-204ENST00000481786 TXLNAP40222 546 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms