RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 FHDC1Q9C0D6 1143 aaPredicted RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 MRS2Q9HD23 443 aa8.81□□□□□ -1
PRDM1-206ENST00000481163 UBR2Q8IWV8 1755 aa8.81□□□□□ -1
PRDM1-206ENST00000481163 SRCAPQ6ZRS2 3230 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 PRAMEF22A3QJZ6 481 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 RPS6KA4O75676 772 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
PRDM1-206ENST00000481163 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 CCDC87Q9NVE4 849 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 SRP68Q9UHB9 627 aaKnown RBP8.8□□□□□ -1
PRDM1-206ENST00000481163 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
PRDM1-206ENST00000481163 MRC1P22897 1456 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
PRDM1-206ENST00000481163 ZNF831Q5JPB2 1677 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 CEMIPQ8WUJ3 1361 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 HTATSF1O43719 755 aaKnown RBP8.79□□□□□ -1
PRDM1-206ENST00000481163 ZPR1O75312 459 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 CYP19A1P11511 503 aaPredicted RBP8.79□□□□□ -1
PRDM1-206ENST00000481163 INTS5Q6P9B9 1019 aaKnown RBP8.79□□□□□ -1
PRDM1-206ENST00000481163 NPM2Q86SE8 214 aaKnown RBP8.79□□□□□ -1
PRDM1-206ENST00000481163 FAM9BQ8IZU0 186 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 NGEFQ8N5V2 710 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 ZBTB1Q9Y2K1 713 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 USP16Q9Y5T5 823 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 C4AP0C0L4 1744 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
PRDM1-206ENST00000481163 HEG1Q9ULI3 1381 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 APAF1O14727 1248 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 STARD3NLO95772 234 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 A1BGP04217 495 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 SYT17Q9BSW7 474 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 TSPYL4Q9UJ04 414 aa8.78□□□□□ -1
PRDM1-206ENST00000481163 MMP10P09238 476 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 USPL1Q5W0Q7 1092 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 BICDL1Q6ZP65 573 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 VSIG10Q8N0Z9 540 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 TEX13AQ9BXU3 409 aaPredicted RBP8.77□□□□□ -1.01
PRDM1-206ENST00000481163 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
PRDM1-206ENST00000481163 KDM3BQ7LBC6 1761 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 SNRPA1P09661 255 aaKnown RBP8.76□□□□□ -1.01
PRDM1-206ENST00000481163 GYS1P13807 737 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 EIF2S2P20042 333 aaKnown RBP8.76□□□□□ -1.01
PRDM1-206ENST00000481163 GPR162Q16538 588 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 NLGN2Q8NFZ4 835 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 PNISRQ8TF01 805 aaKnown RBP8.76□□□□□ -1.01
PRDM1-206ENST00000481163 TRIM35Q9UPQ4 493 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 COL24A1Q17RW2 1714 aa8.76□□□□□ -1.01
PRDM1-206ENST00000481163 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
PRDM1-206ENST00000481163 COL15A1P39059 1388 aa8.75□□□□□ -1.01
PRDM1-206ENST00000481163 MYL6BP14649 208 aa8.75□□□□□ -1.01
PRDM1-206ENST00000481163 FKBP8Q14318 412 aa8.75□□□□□ -1.01
PRDM1-206ENST00000481163 NLGN1Q8N2Q7 840 aa8.75□□□□□ -1.01
PRDM1-206ENST00000481163 SOS1Q07889 1333 aaPredicted RBP8.75□□□□□ -1.01
PRDM1-206ENST00000481163 EIF4A1P60842 406 aaKnown RBP8.74□□□□□ -1.01
PRDM1-206ENST00000481163 NARFQ9UHQ1 456 aa8.74□□□□□ -1.01
PRDM1-206ENST00000481163 AFDNP55196 1824 aaKnown RBP8.74□□□□□ -1.01
PRDM1-206ENST00000481163 USP42Q9H9J4 1324 aaKnown RBP8.74□□□□□ -1.01
PRDM1-206ENST00000481163 CICQ96RK0 1608 aaPredicted RBP8.73□□□□□ -1.01
PRDM1-206ENST00000481163 A0A087WZG4 1122 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 FAM177BA6PVY3 158 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 ELL2O00472 640 aaPredicted RBP8.73□□□□□ -1.01
PRDM1-206ENST00000481163 ZBTB22O15209 634 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 NPHP1O15259 732 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 EIF5P55010 431 aaKnown RBP8.73□□□□□ -1.01
PRDM1-206ENST00000481163 KRT24Q2M2I5 525 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 DZIP3Q86Y13 1208 aaKnown RBP8.73□□□□□ -1.01
PRDM1-206ENST00000481163 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 LAMB4A4D0S4 1761 aa8.73□□□□□ -1.01
PRDM1-206ENST00000481163 A0A0G2JLW4 131 aa8.72□□□□□ -1.01
PRDM1-206ENST00000481163 GIGYF1O75420 1035 aaPredicted RBP8.72□□□□□ -1.01
PRDM1-206ENST00000481163 ANXA1P04083 346 aa8.72□□□□□ -1.01
PRDM1-206ENST00000481163 IL6STP40189 918 aaPredicted RBP8.72□□□□□ -1.01
PRDM1-206ENST00000481163 NUP98P52948 1817 aa8.72□□□□□ -1.01
PRDM1-206ENST00000481163 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 DDR1Q08345 913 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 AIMP1Q12904 312 aaKnown RBP8.71□□□□□ -1.02
PRDM1-206ENST00000481163 NFIXQ14938 502 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 TBC1D9BQ66K14 1250 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
PRDM1-206ENST00000481163 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 BCL2L12Q9HB09 334 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 CHD4Q14839 1912 aa8.71□□□□□ -1.02
PRDM1-206ENST00000481163 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 CHL1O00533 1208 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 SERPINB2P05120 415 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 TM4SF1P30408 202 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 GNAI1P63096 354 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
PRDM1-206ENST00000481163 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 CFAP44Q96MT7 982 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 ZBTB3Q9H5J0 574 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 CD2APQ9Y5K6 639 aa8.7□□□□□ -1.02
PRDM1-206ENST00000481163 BCORQ6W2J9 1755 aa8.69□□□□□ -1.02
PRDM1-206ENST00000481163 POLRMTO00411 1230 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms