RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 GYS1P13807 737 aa22.33■■□□□ 1.17
CDKN1A-207ENST00000478800 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
CDKN1A-207ENST00000478800 ZBTB1Q9Y2K1 713 aa22.33■■□□□ 1.17
CDKN1A-207ENST00000478800 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
CDKN1A-207ENST00000478800 COL24A1Q17RW2 1714 aa22.32■■□□□ 1.16
CDKN1A-207ENST00000478800 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
CDKN1A-207ENST00000478800 SNRPA1P09661 255 aaKnown RBP22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 MIS18AQ9NYP9 233 aa22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 SRP68Q9UHB9 627 aaKnown RBP22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 CD2APQ9Y5K6 639 aa22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 USP42Q9H9J4 1324 aaKnown RBP22.31■■□□□ 1.16
CDKN1A-207ENST00000478800 A0A087WZG4 1122 aa22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 PELP1Q8IZL8 1130 aaKnown RBP22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 PARP3Q9Y6F1 533 aa22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 UTRNP46939 3433 aa22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 SIPA1L3O60292 1781 aaPredicted RBP22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 UBR2Q8IWV8 1755 aa22.3■■□□□ 1.16
CDKN1A-207ENST00000478800 COL15A1P39059 1388 aa22.29■■□□□ 1.16
CDKN1A-207ENST00000478800 GPR162Q16538 588 aa22.29■■□□□ 1.16
CDKN1A-207ENST00000478800 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
CDKN1A-207ENST00000478800 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
CDKN1A-207ENST00000478800 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
CDKN1A-207ENST00000478800 MYH14Q7Z406 1995 aaKnown RBP22.28■■□□□ 1.16
CDKN1A-207ENST00000478800 NARFQ9UHQ1 456 aa22.27■■□□□ 1.16
CDKN1A-207ENST00000478800 A1BGP04217 495 aa22.26■■□□□ 1.15
CDKN1A-207ENST00000478800 FKBP8Q14318 412 aa22.26■■□□□ 1.15
CDKN1A-207ENST00000478800 USP16Q9Y5T5 823 aa22.26■■□□□ 1.15
CDKN1A-207ENST00000478800 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
CDKN1A-207ENST00000478800 EIF5P55010 431 aaKnown RBP22.25■■□□□ 1.15
CDKN1A-207ENST00000478800 TSPYL4Q9UJ04 414 aa22.25■■□□□ 1.15
CDKN1A-207ENST00000478800 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
CDKN1A-207ENST00000478800 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
CDKN1A-207ENST00000478800 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
CDKN1A-207ENST00000478800 C4AP0C0L4 1744 aa22.21■■□□□ 1.15
CDKN1A-207ENST00000478800 EIF4A1P60842 406 aaKnown RBP22.21■■□□□ 1.15
CDKN1A-207ENST00000478800 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
CDKN1A-207ENST00000478800 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
CDKN1A-207ENST00000478800 LAS1LQ9Y4W2 734 aaKnown RBP22.2■■□□□ 1.14
CDKN1A-207ENST00000478800 GIGYF1O75420 1035 aaPredicted RBP22.19■■□□□ 1.14
CDKN1A-207ENST00000478800 PIP4K2AP48426 406 aaPredicted RBP22.19■■□□□ 1.14
CDKN1A-207ENST00000478800 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
CDKN1A-207ENST00000478800 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
CDKN1A-207ENST00000478800 CHD4Q14839 1912 aa22.19■■□□□ 1.14
CDKN1A-207ENST00000478800 APAF1O14727 1248 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 GRIN3BO60391 1043 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 TM4SF1P30408 202 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 TGFB2P61812 414 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 DDR1Q08345 913 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 TRIM35Q9UPQ4 493 aa22.18■■□□□ 1.14
CDKN1A-207ENST00000478800 NFIXQ14938 502 aa22.17■■□□□ 1.14
CDKN1A-207ENST00000478800 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
CDKN1A-207ENST00000478800 POLRMTO00411 1230 aaKnown RBP22.16■■□□□ 1.14
CDKN1A-207ENST00000478800 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
CDKN1A-207ENST00000478800 BCL2L12Q9HB09 334 aa22.16■■□□□ 1.14
CDKN1A-207ENST00000478800 WWC3Q9ULE0 1092 aa22.15■■□□□ 1.14
CDKN1A-207ENST00000478800 C10orf71Q711Q0 1435 aa22.14■■□□□ 1.14
CDKN1A-207ENST00000478800 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.13
CDKN1A-207ENST00000478800 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
CDKN1A-207ENST00000478800 KDM3BQ7LBC6 1761 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 A0A0G2JLW4 131 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 NBPF26B4DH59 902 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 NPHP1O15259 732 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 CAMTA2O94983 1202 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 SERPINB2P05120 415 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 NBPF10Q6P3W6 841 aaKnown RBP22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 NBPF15Q8N660 670 aa22.13■■□□□ 1.13
CDKN1A-207ENST00000478800 CHL1O00533 1208 aa22.12■■□□□ 1.13
CDKN1A-207ENST00000478800 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
CDKN1A-207ENST00000478800 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
CDKN1A-207ENST00000478800 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
CDKN1A-207ENST00000478800 MYL6BP14649 208 aa22.11■■□□□ 1.13
CDKN1A-207ENST00000478800 EIF2S2P20042 333 aaKnown RBP22.11■■□□□ 1.13
CDKN1A-207ENST00000478800 DPEP1P16444 411 aa22.1■■□□□ 1.13
CDKN1A-207ENST00000478800 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
CDKN1A-207ENST00000478800 CFAP44Q96MT7 982 aa22.1■■□□□ 1.13
CDKN1A-207ENST00000478800 PXDNLA1KZ92 1463 aa22.09■■□□□ 1.13
CDKN1A-207ENST00000478800 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
CDKN1A-207ENST00000478800 KIF6Q6ZMV9 814 aa22.09■■□□□ 1.13
CDKN1A-207ENST00000478800 CARMIL3Q8ND23 1372 aa22.09■■□□□ 1.13
CDKN1A-207ENST00000478800 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
CDKN1A-207ENST00000478800 GNAI1P63096 354 aa22.07■■□□□ 1.12
CDKN1A-207ENST00000478800 ZNF784Q8NCA9 323 aaPredicted RBP22.07■■□□□ 1.12
CDKN1A-207ENST00000478800 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
CDKN1A-207ENST00000478800 PIM2Q9P1W9 311 aa22.07■■□□□ 1.12
CDKN1A-207ENST00000478800 RGL2O15211 777 aa22.06■■□□□ 1.12
CDKN1A-207ENST00000478800 LAMB4A4D0S4 1761 aa22.05■■□□□ 1.12
CDKN1A-207ENST00000478800 SCN7AQ01118 1682 aa22.05■■□□□ 1.12
CDKN1A-207ENST00000478800 CNBD1Q8NA66 436 aa22.05■■□□□ 1.12
CDKN1A-207ENST00000478800 NECTIN2Q92692 538 aa22.05■■□□□ 1.12
CDKN1A-207ENST00000478800 CHRNA5P30532 468 aa22.04■■□□□ 1.12
CDKN1A-207ENST00000478800 ST5P78524 1137 aa22.04■■□□□ 1.12
CDKN1A-207ENST00000478800 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
CDKN1A-207ENST00000478800 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
CDKN1A-207ENST00000478800 NIP7Q9Y221 180 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDKN1A-207ENST00000478800 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
CDKN1A-207ENST00000478800 ERVV-1B6SEH8 477 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms