RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 ARXQ96QS3 562 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-218ENST00000478365 PHF14O94880 888 aa10.4□□□□□ -0.74
DDX39B-218ENST00000478365 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
DDX39B-218ENST00000478365 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
DDX39B-218ENST00000478365 DNAJC10Q8IXB1 793 aa10.4□□□□□ -0.74
DDX39B-218ENST00000478365 ZNF496Q96IT1 587 aaPredicted RBP10.4□□□□□ -0.74
DDX39B-218ENST00000478365 ADAMTS8Q9UP79 889 aa10.4□□□□□ -0.74
DDX39B-218ENST00000478365 NGEFQ8N5V2 710 aa10.39□□□□□ -0.75
DDX39B-218ENST00000478365 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-218ENST00000478365 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
DDX39B-218ENST00000478365 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
DDX39B-218ENST00000478365 SOS1Q07889 1333 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-218ENST00000478365 RGL2O15211 777 aa10.38□□□□□ -0.75
DDX39B-218ENST00000478365 ZPR1O75312 459 aa10.38□□□□□ -0.75
DDX39B-218ENST00000478365 IL6STP40189 918 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-218ENST00000478365 INTS5Q6P9B9 1019 aaKnown RBP10.38□□□□□ -0.75
DDX39B-218ENST00000478365 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
DDX39B-218ENST00000478365 COL15A1P39059 1388 aa10.38□□□□□ -0.75
DDX39B-218ENST00000478365 USP42Q9H9J4 1324 aaKnown RBP10.37□□□□□ -0.75
DDX39B-218ENST00000478365 LAMB4A4D0S4 1761 aa10.37□□□□□ -0.75
DDX39B-218ENST00000478365 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
DDX39B-218ENST00000478365 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
DDX39B-218ENST00000478365 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
DDX39B-218ENST00000478365 CD2APQ9Y5K6 639 aa10.37□□□□□ -0.75
DDX39B-218ENST00000478365 ERBB4Q15303 1308 aa10.36□□□□□ -0.75
DDX39B-218ENST00000478365 CCDC146Q8IYE0 955 aa10.36□□□□□ -0.75
DDX39B-218ENST00000478365 TSPYL4Q9UJ04 414 aa10.36□□□□□ -0.75
DDX39B-218ENST00000478365 GYS1P13807 737 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
DDX39B-218ENST00000478365 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 SYT17Q9BSW7 474 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 FHDC1Q9C0D6 1143 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-218ENST00000478365 NARFQ9UHQ1 456 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 ZBTB1Q9Y2K1 713 aa10.35□□□□□ -0.75
DDX39B-218ENST00000478365 MMP10P09238 476 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 HOXB7P09629 217 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 EIF4A1P60842 406 aaKnown RBP10.34□□□□□ -0.75
DDX39B-218ENST00000478365 GNAI1P63096 354 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 AMIGO3Q86WK7 504 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 ZNF652Q9Y2D9 606 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
DDX39B-218ENST00000478365 CHL1O00533 1208 aa10.33□□□□□ -0.76
DDX39B-218ENST00000478365 APAF1O14727 1248 aa10.33□□□□□ -0.76
DDX39B-218ENST00000478365 KCNQ3O43525 872 aa10.33□□□□□ -0.76
DDX39B-218ENST00000478365 GIGYF1O75420 1035 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-218ENST00000478365 CANXP27824 592 aaKnown RBP10.33□□□□□ -0.76
DDX39B-218ENST00000478365 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
DDX39B-218ENST00000478365 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
DDX39B-218ENST00000478365 RRP7AQ9Y3A4 280 aaKnown RBP10.33□□□□□ -0.76
DDX39B-218ENST00000478365 SCN7AQ01118 1682 aa10.33□□□□□ -0.76
DDX39B-218ENST00000478365 CLEC4GQ6UXB4 293 aa10.32□□□□□ -0.76
DDX39B-218ENST00000478365 DAXXQ9UER7 740 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-218ENST00000478365 IL16Q14005 1332 aa10.32□□□□□ -0.76
DDX39B-218ENST00000478365 KIF13BQ9NQT8 1826 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 CCER2I3L3R5 266 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 TGFB2P61812 414 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 DZIP3Q86Y13 1208 aaKnown RBP10.31□□□□□ -0.76
DDX39B-218ENST00000478365 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 USP16Q9Y5T5 823 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 C10orf71Q711Q0 1435 aa10.31□□□□□ -0.76
DDX39B-218ENST00000478365 CARMIL3Q8ND23 1372 aa10.3□□□□□ -0.76
DDX39B-218ENST00000478365 BCORQ6W2J9 1755 aa10.3□□□□□ -0.76
DDX39B-218ENST00000478365 GRIN3BO60391 1043 aa10.3□□□□□ -0.76
DDX39B-218ENST00000478365 A1BGP04217 495 aa10.3□□□□□ -0.76
DDX39B-218ENST00000478365 MIS18AQ9NYP9 233 aa10.3□□□□□ -0.76
DDX39B-218ENST00000478365 SRP68Q9UHB9 627 aaKnown RBP10.3□□□□□ -0.76
DDX39B-218ENST00000478365 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-218ENST00000478365 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 NPM3O75607 178 aaKnown RBP10.29□□□□□ -0.76
DDX39B-218ENST00000478365 ZNF853P0CG23 659 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 TM4SF1P30408 202 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
DDX39B-218ENST00000478365 FKBP8Q14318 412 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
DDX39B-218ENST00000478365 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
DDX39B-218ENST00000478365 CAMTA2O94983 1202 aa10.28□□□□□ -0.76
DDX39B-218ENST00000478365 SMIM5Q71RC9 77 aa10.28□□□□□ -0.76
DDX39B-218ENST00000478365 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
DDX39B-218ENST00000478365 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
DDX39B-218ENST00000478365 LAS1LQ9Y4W2 734 aaKnown RBP10.28□□□□□ -0.76
DDX39B-218ENST00000478365 NRXN2Q9P2S2 1712 aa10.27□□□□□ -0.76
DDX39B-218ENST00000478365 CHD4Q14839 1912 aa10.27□□□□□ -0.76
DDX39B-218ENST00000478365 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 NPHP1O15259 732 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 NFIXQ14938 502 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 GPR162Q16538 588 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 NBPF10Q6P3W6 841 aaKnown RBP10.27□□□□□ -0.77
DDX39B-218ENST00000478365 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 NBPF15Q8N660 670 aa10.27□□□□□ -0.77
DDX39B-218ENST00000478365 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms