RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PHF14O94880 888 aa16.21■□□□□ 0.19
CLCNKA-205ENST00000477360 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
CLCNKA-205ENST00000477360 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
CLCNKA-205ENST00000477360 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
CLCNKA-205ENST00000477360 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-205ENST00000477360 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-205ENST00000477360 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
CLCNKA-205ENST00000477360 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
CLCNKA-205ENST00000477360 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
CLCNKA-205ENST00000477360 CCDC146Q8IYE0 955 aa16.19■□□□□ 0.18
CLCNKA-205ENST00000477360 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
CLCNKA-205ENST00000477360 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
CLCNKA-205ENST00000477360 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
CLCNKA-205ENST00000477360 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 COL15A1P39059 1388 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 CHL1O00533 1208 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 KCNQ3O43525 872 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 GYS1P13807 737 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 SYT17Q9BSW7 474 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CLCNKA-205ENST00000477360 ZPR1O75312 459 aa16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 FHDC1Q9C0D6 1143 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 TSPYL4Q9UJ04 414 aa16.17■□□□□ 0.18
CLCNKA-205ENST00000477360 APAF1O14727 1248 aa16.16■□□□□ 0.18
CLCNKA-205ENST00000477360 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-205ENST00000477360 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-205ENST00000477360 HOXB7P09629 217 aa16.15■□□□□ 0.18
CLCNKA-205ENST00000477360 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
CLCNKA-205ENST00000477360 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
CLCNKA-205ENST00000477360 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
CLCNKA-205ENST00000477360 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
CLCNKA-205ENST00000477360 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 MMP10P09238 476 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 TM4SF1P30408 202 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 GNAI1P63096 354 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 IL16Q14005 1332 aa16.13■□□□□ 0.17
CLCNKA-205ENST00000477360 A1BGP04217 495 aa16.12■□□□□ 0.17
CLCNKA-205ENST00000477360 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
CLCNKA-205ENST00000477360 LAMB4A4D0S4 1761 aa16.11■□□□□ 0.17
CLCNKA-205ENST00000477360 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
CLCNKA-205ENST00000477360 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
CLCNKA-205ENST00000477360 TGFB2P61812 414 aa16.1■□□□□ 0.17
CLCNKA-205ENST00000477360 FKBP8Q14318 412 aa16.1■□□□□ 0.17
CLCNKA-205ENST00000477360 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
CLCNKA-205ENST00000477360 NBPF26B4DH59 902 aa16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 NBPF10Q6P3W6 841 aaKnown RBP16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
CLCNKA-205ENST00000477360 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 MIER1Q8N108 512 aa16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 BCL2L12Q9HB09 334 aa16.08■□□□□ 0.16
CLCNKA-205ENST00000477360 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-205ENST00000477360 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
CLCNKA-205ENST00000477360 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
CLCNKA-205ENST00000477360 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
CLCNKA-205ENST00000477360 DDR1Q08345 913 aa16.06■□□□□ 0.16
CLCNKA-205ENST00000477360 NFIXQ14938 502 aa16.06■□□□□ 0.16
CLCNKA-205ENST00000477360 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
CLCNKA-205ENST00000477360 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
CLCNKA-205ENST00000477360 CARMIL3Q8ND23 1372 aa16.05■□□□□ 0.16
CLCNKA-205ENST00000477360 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
CLCNKA-205ENST00000477360 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
CLCNKA-205ENST00000477360 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
CLCNKA-205ENST00000477360 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLCNKA-205ENST00000477360 PDIA6Q15084 440 aa16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 NLGN2Q8NFZ4 835 aa16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-205ENST00000477360 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 SERPINB2P05120 415 aa16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 FAM9BQ8IZU0 186 aa16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 ZNF330Q9Y3S2 320 aaPredicted RBP16.02■□□□□ 0.16
CLCNKA-205ENST00000477360 BCORQ6W2J9 1755 aa16.02■□□□□ 0.15
CLCNKA-205ENST00000477360 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms