RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
APTX-220ENST00000476858 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
APTX-220ENST00000476858 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
APTX-220ENST00000476858 APAF1O14727 1248 aa16.44■□□□□ 0.22
APTX-220ENST00000476858 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
APTX-220ENST00000476858 KDM3BQ7LBC6 1761 aa16.43■□□□□ 0.22
APTX-220ENST00000476858 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
APTX-220ENST00000476858 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
APTX-220ENST00000476858 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
APTX-220ENST00000476858 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
APTX-220ENST00000476858 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
APTX-220ENST00000476858 NEFMP07197 916 aa16.42■□□□□ 0.22
APTX-220ENST00000476858 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
APTX-220ENST00000476858 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
APTX-220ENST00000476858 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
APTX-220ENST00000476858 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
APTX-220ENST00000476858 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
APTX-220ENST00000476858 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
APTX-220ENST00000476858 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
APTX-220ENST00000476858 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
APTX-220ENST00000476858 A1BGP04217 495 aa16.4■□□□□ 0.22
APTX-220ENST00000476858 SSFA2P28290 1259 aa16.4■□□□□ 0.22
APTX-220ENST00000476858 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
APTX-220ENST00000476858 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
APTX-220ENST00000476858 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
APTX-220ENST00000476858 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
APTX-220ENST00000476858 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
APTX-220ENST00000476858 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
APTX-220ENST00000476858 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
APTX-220ENST00000476858 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
APTX-220ENST00000476858 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
APTX-220ENST00000476858 POLA2Q14181 598 aa16.37■□□□□ 0.21
APTX-220ENST00000476858 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
APTX-220ENST00000476858 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
APTX-220ENST00000476858 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
APTX-220ENST00000476858 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 GYS1P13807 737 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
APTX-220ENST00000476858 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 ARXQ96QS3 562 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
APTX-220ENST00000476858 PPP1R1BQ9UD71 204 aaPredicted RBP16.35■□□□□ 0.21
APTX-220ENST00000476858 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
APTX-220ENST00000476858 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
APTX-220ENST00000476858 FKBP8Q14318 412 aa16.34■□□□□ 0.21
APTX-220ENST00000476858 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
APTX-220ENST00000476858 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
APTX-220ENST00000476858 COL15A1P39059 1388 aa16.34■□□□□ 0.21
APTX-220ENST00000476858 CHL1O00533 1208 aa16.33■□□□□ 0.2
APTX-220ENST00000476858 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
APTX-220ENST00000476858 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.2
APTX-220ENST00000476858 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
APTX-220ENST00000476858 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
APTX-220ENST00000476858 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
APTX-220ENST00000476858 RFC4P35249 363 aa16.32■□□□□ 0.2
APTX-220ENST00000476858 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
APTX-220ENST00000476858 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
APTX-220ENST00000476858 MIER1Q8N108 512 aa16.32■□□□□ 0.2
APTX-220ENST00000476858 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
APTX-220ENST00000476858 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
APTX-220ENST00000476858 STARD3NLO95772 234 aa16.31■□□□□ 0.2
APTX-220ENST00000476858 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
APTX-220ENST00000476858 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
APTX-220ENST00000476858 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
APTX-220ENST00000476858 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
APTX-220ENST00000476858 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
APTX-220ENST00000476858 MMP10P09238 476 aa16.3■□□□□ 0.2
APTX-220ENST00000476858 DDR1Q08345 913 aa16.3■□□□□ 0.2
APTX-220ENST00000476858 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
APTX-220ENST00000476858 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
APTX-220ENST00000476858 ANXA1P04083 346 aa16.29■□□□□ 0.2
APTX-220ENST00000476858 POLD1P28340 1107 aa16.29■□□□□ 0.2
APTX-220ENST00000476858 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
APTX-220ENST00000476858 TEX13AQ9BXU3 409 aaPredicted RBP16.29■□□□□ 0.2
APTX-220ENST00000476858 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
APTX-220ENST00000476858 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
APTX-220ENST00000476858 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
APTX-220ENST00000476858 SCN7AQ01118 1682 aa16.27■□□□□ 0.2
APTX-220ENST00000476858 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
APTX-220ENST00000476858 PDIA6Q15084 440 aa16.27■□□□□ 0.2
APTX-220ENST00000476858 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
APTX-220ENST00000476858 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
APTX-220ENST00000476858 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
APTX-220ENST00000476858 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
APTX-220ENST00000476858 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
APTX-220ENST00000476858 TM4SF1P30408 202 aa16.26■□□□□ 0.19
APTX-220ENST00000476858 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
APTX-220ENST00000476858 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
APTX-220ENST00000476858 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
APTX-220ENST00000476858 MYL6BP14649 208 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 NFIXQ14938 502 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
APTX-220ENST00000476858 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
APTX-220ENST00000476858 ELL2O00472 640 aaPredicted RBP16.24■□□□□ 0.19
APTX-220ENST00000476858 ZPR1O75312 459 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms