RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 VWA5B2Q8N398 1253 aa12.69□□□□□ -0.38
SMC5-203ENST00000475540 TSPAN10Q9H1Z9 355 aaPredicted RBP12.69□□□□□ -0.38
SMC5-203ENST00000475540 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
SMC5-203ENST00000475540 MSX1P28360 303 aa12.68□□□□□ -0.38
SMC5-203ENST00000475540 TEAD4Q15561 434 aa12.68□□□□□ -0.38
SMC5-203ENST00000475540 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
SMC5-203ENST00000475540 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
SMC5-203ENST00000475540 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
SMC5-203ENST00000475540 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 VSIG8P0DPA2 414 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 NOS2P35228 1153 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 PGBD3Q8N328 593 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 L3MBTL2Q969R5 705 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 CUEDC1Q9NWM3 386 aaPredicted RBP12.67□□□□□ -0.38
SMC5-203ENST00000475540 ZNF232Q9UNY5 417 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
SMC5-203ENST00000475540 PPP1R15AO75807 674 aaPredicted RBP12.66□□□□□ -0.38
SMC5-203ENST00000475540 DBN1Q16643 649 aa12.66□□□□□ -0.38
SMC5-203ENST00000475540 LCE2AQ5TA79 106 aaPredicted RBP12.66□□□□□ -0.38
SMC5-203ENST00000475540 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
SMC5-203ENST00000475540 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
SMC5-203ENST00000475540 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
SMC5-203ENST00000475540 SERTM1A2A2V5 107 aa12.65□□□□□ -0.38
SMC5-203ENST00000475540 PSMA6P60900 246 aaKnown RBP12.65□□□□□ -0.38
SMC5-203ENST00000475540 SCG3Q8WXD2 468 aaKnown RBP12.65□□□□□ -0.38
SMC5-203ENST00000475540 ARID3AQ99856 593 aa12.65□□□□□ -0.38
SMC5-203ENST00000475540 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
SMC5-203ENST00000475540 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
SMC5-203ENST00000475540 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
SMC5-203ENST00000475540 LGR5O75473 907 aa12.63□□□□□ -0.39
SMC5-203ENST00000475540 ZDHHC1Q8WTX9 485 aa12.63□□□□□ -0.39
SMC5-203ENST00000475540 NUCKS1Q9H1E3 243 aaKnown RBP12.63□□□□□ -0.39
SMC5-203ENST00000475540 RUBCNLQ9H714 662 aa12.63□□□□□ -0.39
SMC5-203ENST00000475540 ZDHHC3Q9NYG2 299 aa12.63□□□□□ -0.39
SMC5-203ENST00000475540 ZMIZ1Q9ULJ6 1067 aa12.63□□□□□ -0.39
SMC5-203ENST00000475540 GMPRP36959 345 aa12.62□□□□□ -0.39
SMC5-203ENST00000475540 EFHC2Q5JST6 749 aa12.62□□□□□ -0.39
SMC5-203ENST00000475540 CHMP7Q8WUX9 453 aaPredicted RBP12.62□□□□□ -0.39
SMC5-203ENST00000475540 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
SMC5-203ENST00000475540 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
SMC5-203ENST00000475540 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
SMC5-203ENST00000475540 ARSJQ5FYB0 599 aaPredicted RBP12.61□□□□□ -0.39
SMC5-203ENST00000475540 LCE2CQ5TA81 110 aa12.61□□□□□ -0.39
SMC5-203ENST00000475540 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
SMC5-203ENST00000475540 C21orf2O43822 256 aa12.6□□□□□ -0.39
SMC5-203ENST00000475540 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
SMC5-203ENST00000475540 STK32AQ8WU08 396 aa12.6□□□□□ -0.39
SMC5-203ENST00000475540 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
SMC5-203ENST00000475540 EML1O00423 815 aa12.59□□□□□ -0.39
SMC5-203ENST00000475540 IGFBP4P22692 258 aa12.59□□□□□ -0.39
SMC5-203ENST00000475540 TXLNAP40222 546 aa12.59□□□□□ -0.39
SMC5-203ENST00000475540 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
SMC5-203ENST00000475540 GTPBP3Q969Y2 492 aaKnown RBP12.59□□□□□ -0.39
SMC5-203ENST00000475540 HCN4Q9Y3Q4 1203 aa12.59□□□□□ -0.39
SMC5-203ENST00000475540 ATP4AP20648 1035 aa12.58□□□□□ -0.4
SMC5-203ENST00000475540 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.4
SMC5-203ENST00000475540 C2orf49Q9BVC5 232 aaPredicted RBP12.58□□□□□ -0.4
SMC5-203ENST00000475540 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
SMC5-203ENST00000475540 SH3PXD2AQ5TCZ1 1133 aa12.57□□□□□ -0.4
SMC5-203ENST00000475540 TMEM164Q5U3C3 297 aa12.57□□□□□ -0.4
SMC5-203ENST00000475540 A0A1W2PNR3 127 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 WEE1P30291 646 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 NLRP8Q86W28 1048 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 ZIC5Q96T25 663 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
SMC5-203ENST00000475540 NEUROD4Q9HD90 331 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
SMC5-203ENST00000475540 WIPF1O43516 503 aa12.55□□□□□ -0.4
SMC5-203ENST00000475540 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
SMC5-203ENST00000475540 C1orf53Q5VUE5 145 aa12.55□□□□□ -0.4
SMC5-203ENST00000475540 GPR25O00155 361 aa12.54□□□□□ -0.4
SMC5-203ENST00000475540 FIGNL1Q6PIW4 674 aa12.54□□□□□ -0.4
SMC5-203ENST00000475540 VTI1AQ96AJ9 217 aa12.54□□□□□ -0.4
SMC5-203ENST00000475540 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
SMC5-203ENST00000475540 FOXO3O43524 673 aa12.53□□□□□ -0.4
SMC5-203ENST00000475540 THBS1P07996 1170 aa12.53□□□□□ -0.4
SMC5-203ENST00000475540 PRIMPOLQ96LW4 560 aa12.53□□□□□ -0.4
SMC5-203ENST00000475540 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
SMC5-203ENST00000475540 GPC6Q9Y625 555 aaPredicted RBP12.53□□□□□ -0.4
SMC5-203ENST00000475540 PRMT3O60678 531 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 ALDH16A1Q8IZ83 802 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 CFHR5Q9BXR6 569 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.41
SMC5-203ENST00000475540 ZCCHC2Q9C0B9 1178 aaKnown RBP12.52□□□□□ -0.41
SMC5-203ENST00000475540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMC5-203ENST00000475540 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
SMC5-203ENST00000475540 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
SMC5-203ENST00000475540 PCDHGC4Q9Y5F7 938 aa12.5□□□□□ -0.41
SMC5-203ENST00000475540 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
SMC5-203ENST00000475540 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
SMC5-203ENST00000475540 ANKIB1Q9P2G1 1089 aa12.49□□□□□ -0.41
SMC5-203ENST00000475540 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
SMC5-203ENST00000475540 INSM1Q01101 510 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms