RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
VANGL1-205ENST00000474344 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
VANGL1-205ENST00000474344 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
VANGL1-205ENST00000474344 GNAI1P63096 354 aa13.62□□□□□ -0.23
VANGL1-205ENST00000474344 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
VANGL1-205ENST00000474344 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
VANGL1-205ENST00000474344 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
VANGL1-205ENST00000474344 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
VANGL1-205ENST00000474344 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
VANGL1-205ENST00000474344 SSFA2P28290 1259 aa13.61□□□□□ -0.23
VANGL1-205ENST00000474344 AK7Q96M32 723 aa13.61□□□□□ -0.23
VANGL1-205ENST00000474344 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
VANGL1-205ENST00000474344 NUP98P52948 1817 aa13.61□□□□□ -0.23
VANGL1-205ENST00000474344 LRP5O75197 1615 aa13.61□□□□□ -0.23
VANGL1-205ENST00000474344 GNPATO15228 680 aa13.6□□□□□ -0.23
VANGL1-205ENST00000474344 STARD3NLO95772 234 aa13.6□□□□□ -0.23
VANGL1-205ENST00000474344 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
VANGL1-205ENST00000474344 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
VANGL1-205ENST00000474344 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
VANGL1-205ENST00000474344 SALL2Q9Y467 1007 aaPredicted RBP13.6□□□□□ -0.23
VANGL1-205ENST00000474344 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
VANGL1-205ENST00000474344 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
VANGL1-205ENST00000474344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
VANGL1-205ENST00000474344 A1BGP04217 495 aa13.59□□□□□ -0.23
VANGL1-205ENST00000474344 ADRA2BP18089 450 aa13.59□□□□□ -0.23
VANGL1-205ENST00000474344 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
VANGL1-205ENST00000474344 FLAD1Q8NFF5 587 aa13.59□□□□□ -0.23
VANGL1-205ENST00000474344 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
VANGL1-205ENST00000474344 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
VANGL1-205ENST00000474344 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
VANGL1-205ENST00000474344 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
VANGL1-205ENST00000474344 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
VANGL1-205ENST00000474344 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
VANGL1-205ENST00000474344 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
VANGL1-205ENST00000474344 RTCBQ9Y3I0 505 aaKnown RBP13.58□□□□□ -0.24
VANGL1-205ENST00000474344 LRP10Q7Z4F1 713 aa13.57□□□□□ -0.24
VANGL1-205ENST00000474344 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
VANGL1-205ENST00000474344 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
VANGL1-205ENST00000474344 HOXB7P09629 217 aa13.56□□□□□ -0.24
VANGL1-205ENST00000474344 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
VANGL1-205ENST00000474344 PDIA6Q15084 440 aa13.56□□□□□ -0.24
VANGL1-205ENST00000474344 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
VANGL1-205ENST00000474344 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
VANGL1-205ENST00000474344 C8orf58Q8NAV2 365 aa13.56□□□□□ -0.24
VANGL1-205ENST00000474344 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
VANGL1-205ENST00000474344 PTGER2P43116 358 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 COL15A1P39059 1388 aa13.55□□□□□ -0.24
VANGL1-205ENST00000474344 PHF14O94880 888 aa13.54□□□□□ -0.24
VANGL1-205ENST00000474344 ZBTB7AO95365 584 aa13.54□□□□□ -0.24
VANGL1-205ENST00000474344 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
VANGL1-205ENST00000474344 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
VANGL1-205ENST00000474344 GOLGB1Q14789 3259 aaKnown RBP13.53□□□□□ -0.24
VANGL1-205ENST00000474344 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 GYS1P13807 737 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 PIP4K2AP48426 406 aaPredicted RBP13.53□□□□□ -0.24
VANGL1-205ENST00000474344 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
VANGL1-205ENST00000474344 NRXN2Q9P2S2 1712 aa13.53□□□□□ -0.24
VANGL1-205ENST00000474344 PROSER3Q2NL68 480 aa13.52□□□□□ -0.25
VANGL1-205ENST00000474344 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
VANGL1-205ENST00000474344 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
VANGL1-205ENST00000474344 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
VANGL1-205ENST00000474344 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.25
VANGL1-205ENST00000474344 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
VANGL1-205ENST00000474344 RFC4P35249 363 aa13.51□□□□□ -0.25
VANGL1-205ENST00000474344 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
VANGL1-205ENST00000474344 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
VANGL1-205ENST00000474344 A0A087WZG4 1122 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 E9PSI1 815 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
VANGL1-205ENST00000474344 MSH5O43196 834 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 VAMP4O75379 141 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
VANGL1-205ENST00000474344 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
VANGL1-205ENST00000474344 RGL2O15211 777 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 ANXA1P04083 346 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 TM4SF1P30408 202 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 FKBP8Q14318 412 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
VANGL1-205ENST00000474344 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 NLGN1Q8N2Q7 840 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
VANGL1-205ENST00000474344 KIAA1551Q9HCM1 1747 aa13.48□□□□□ -0.25
VANGL1-205ENST00000474344 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
VANGL1-205ENST00000474344 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
VANGL1-205ENST00000474344 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
VANGL1-205ENST00000474344 DZIP3Q86Y13 1208 aaKnown RBP13.48□□□□□ -0.25
VANGL1-205ENST00000474344 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
VANGL1-205ENST00000474344 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms