RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 RGPD3A6NKT7 1758 aaPredicted RBP13.49□□□□□ -0.25
CASC3-204ENST00000474190 RGPD4Q7Z3J3 1758 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 TJP1Q07157 1748 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
CASC3-204ENST00000474190 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
CASC3-204ENST00000474190 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
CASC3-204ENST00000474190 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
CASC3-204ENST00000474190 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
CASC3-204ENST00000474190 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
CASC3-204ENST00000474190 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
CASC3-204ENST00000474190 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
CASC3-204ENST00000474190 A1BGP04217 495 aa13.46□□□□□ -0.25
CASC3-204ENST00000474190 HOXB7P09629 217 aa13.46□□□□□ -0.25
CASC3-204ENST00000474190 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
CASC3-204ENST00000474190 C5P01031 1676 aa13.46□□□□□ -0.26
CASC3-204ENST00000474190 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
CASC3-204ENST00000474190 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
CASC3-204ENST00000474190 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
CASC3-204ENST00000474190 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
CASC3-204ENST00000474190 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
CASC3-204ENST00000474190 ANXA1P04083 346 aa13.43□□□□□ -0.26
CASC3-204ENST00000474190 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
CASC3-204ENST00000474190 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
CASC3-204ENST00000474190 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
CASC3-204ENST00000474190 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
CASC3-204ENST00000474190 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
CASC3-204ENST00000474190 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
CASC3-204ENST00000474190 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
CASC3-204ENST00000474190 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
CASC3-204ENST00000474190 PNPLA7Q6ZV29 1317 aa13.41□□□□□ -0.26
CASC3-204ENST00000474190 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
CASC3-204ENST00000474190 RPS6KA4O75676 772 aa13.41□□□□□ -0.26
CASC3-204ENST00000474190 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
CASC3-204ENST00000474190 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
CASC3-204ENST00000474190 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
CASC3-204ENST00000474190 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
CASC3-204ENST00000474190 UTRNP46939 3433 aa13.4□□□□□ -0.26
CASC3-204ENST00000474190 STARD3NLO95772 234 aa13.4□□□□□ -0.26
CASC3-204ENST00000474190 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
CASC3-204ENST00000474190 G2E3Q7L622 706 aa13.4□□□□□ -0.26
CASC3-204ENST00000474190 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
CASC3-204ENST00000474190 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
CASC3-204ENST00000474190 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
CASC3-204ENST00000474190 GNPATO15228 680 aa13.39□□□□□ -0.27
CASC3-204ENST00000474190 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
CASC3-204ENST00000474190 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
CASC3-204ENST00000474190 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
CASC3-204ENST00000474190 DDX21Q9NR30 783 aaKnown RBP eCLIP13.39□□□□□ -0.27
CASC3-204ENST00000474190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
CASC3-204ENST00000474190 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
CASC3-204ENST00000474190 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
CASC3-204ENST00000474190 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
CASC3-204ENST00000474190 SSFA2P28290 1259 aa13.37□□□□□ -0.27
CASC3-204ENST00000474190 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
CASC3-204ENST00000474190 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
CASC3-204ENST00000474190 COL15A1P39059 1388 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 BCAR3O75815 825 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 MYL6BP14649 208 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 AK7Q96M32 723 aa13.36□□□□□ -0.27
CASC3-204ENST00000474190 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
CASC3-204ENST00000474190 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
CASC3-204ENST00000474190 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
CASC3-204ENST00000474190 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
CASC3-204ENST00000474190 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
CASC3-204ENST00000474190 ADCY9O60503 1353 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 PHF14O94880 888 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 GYS1P13807 737 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 ADRA2BP18089 450 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 HLFQ16534 295 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
CASC3-204ENST00000474190 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
CASC3-204ENST00000474190 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
CASC3-204ENST00000474190 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
CASC3-204ENST00000474190 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
CASC3-204ENST00000474190 FLIIQ13045 1269 aa13.32□□□□□ -0.28
CASC3-204ENST00000474190 TRAPPC3LQ5T215 181 aa13.32□□□□□ -0.28
CASC3-204ENST00000474190 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
CASC3-204ENST00000474190 FKBP8Q14318 412 aa13.31□□□□□ -0.28
CASC3-204ENST00000474190 USPL1Q5W0Q7 1092 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms