RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
FN1-219ENST00000474036 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
FN1-219ENST00000474036 F11P03951 625 aa8.84□□□□□ -0.99
FN1-219ENST00000474036 MARSP56192 900 aaKnown RBP8.84□□□□□ -0.99
FN1-219ENST00000474036 VAC14Q08AM6 782 aa8.84□□□□□ -0.99
FN1-219ENST00000474036 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
FN1-219ENST00000474036 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
FN1-219ENST00000474036 ADAMTSL3P82987 1691 aa8.84□□□□□ -0.99
FN1-219ENST00000474036 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
FN1-219ENST00000474036 PTPRGP23470 1445 aa8.83□□□□□ -1
FN1-219ENST00000474036 RNF225M0QZC1 329 aaPredicted RBP8.83□□□□□ -1
FN1-219ENST00000474036 UBAP2LQ14157 1087 aaKnown RBP8.83□□□□□ -1
FN1-219ENST00000474036 WDR44Q5JSH3 913 aa8.83□□□□□ -1
FN1-219ENST00000474036 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
FN1-219ENST00000474036 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
FN1-219ENST00000474036 ETNK1Q9HBU6 452 aa8.83□□□□□ -1
FN1-219ENST00000474036 PTPRMP28827 1452 aa8.83□□□□□ -1
FN1-219ENST00000474036 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
FN1-219ENST00000474036 H7C1W4 665 aa8.82□□□□□ -1
FN1-219ENST00000474036 C4orf17Q53FE4 359 aa8.82□□□□□ -1
FN1-219ENST00000474036 ZNF592Q92610 1267 aa8.82□□□□□ -1
FN1-219ENST00000474036 GDPD2Q9HCC8 539 aa8.82□□□□□ -1
FN1-219ENST00000474036 BCORL1Q5H9F3 1711 aa8.82□□□□□ -1
FN1-219ENST00000474036 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
FN1-219ENST00000474036 MAP3K10Q02779 954 aa8.81□□□□□ -1
FN1-219ENST00000474036 FOXR1Q6PIV2 292 aa8.81□□□□□ -1
FN1-219ENST00000474036 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
FN1-219ENST00000474036 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
FN1-219ENST00000474036 DOLKQ9UPQ8 538 aa8.81□□□□□ -1
FN1-219ENST00000474036 APBB1O00213 710 aa8.8□□□□□ -1
FN1-219ENST00000474036 BCRP11274 1271 aa8.8□□□□□ -1
FN1-219ENST00000474036 MCM6Q14566 821 aa8.8□□□□□ -1
FN1-219ENST00000474036 RUBCNLQ9H714 662 aa8.8□□□□□ -1
FN1-219ENST00000474036 KIAA0586Q9BVV6 1533 aa8.8□□□□□ -1
FN1-219ENST00000474036 MX2P20592 715 aa8.79□□□□□ -1
FN1-219ENST00000474036 HSPA2P54652 639 aa8.79□□□□□ -1
FN1-219ENST00000474036 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
FN1-219ENST00000474036 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
FN1-219ENST00000474036 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
FN1-219ENST00000474036 RNF135Q8IUD6 432 aa8.79□□□□□ -1
FN1-219ENST00000474036 SCARF2Q96GP6 870 aaPredicted RBP8.79□□□□□ -1
FN1-219ENST00000474036 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
FN1-219ENST00000474036 ITGB2P05107 769 aa8.78□□□□□ -1
FN1-219ENST00000474036 MSX1P28360 303 aa8.78□□□□□ -1
FN1-219ENST00000474036 ABL2P42684 1182 aa8.78□□□□□ -1
FN1-219ENST00000474036 SCNN1DP51172 638 aa8.78□□□□□ -1
FN1-219ENST00000474036 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
FN1-219ENST00000474036 DNMT3AQ9Y6K1 912 aaPredicted RBP8.78□□□□□ -1
FN1-219ENST00000474036 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
FN1-219ENST00000474036 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
FN1-219ENST00000474036 TNIKQ9UKE5 1360 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 USP4Q13107 963 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 KANK3Q6NY19 840 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 IQGAP2Q13576 1575 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
FN1-219ENST00000474036 UACAQ9BZF9 1416 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 SHISA8B8ZZ34 492 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
FN1-219ENST00000474036 C2CD2LO14523 706 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 PPARGC1BQ86YN6 1023 aaKnown RBP8.75□□□□□ -1.01
FN1-219ENST00000474036 NEDD1Q8NHV4 660 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 CFHR5Q9BXR6 569 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
FN1-219ENST00000474036 ARID4BQ4LE39 1312 aaPredicted RBP8.75□□□□□ -1.01
FN1-219ENST00000474036 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 OIP5O43482 229 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
FN1-219ENST00000474036 TLR1Q15399 786 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 ESCO1Q5FWF5 840 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 KLRG1Q96E93 195 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 OXCT2Q9BYC2 517 aaPredicted RBP8.74□□□□□ -1.01
FN1-219ENST00000474036 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 UHRF1BP1LA0JNW5 1464 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 WDR7Q9Y4E6 1490 aa8.74□□□□□ -1.01
FN1-219ENST00000474036 CD109Q6YHK3 1445 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 NDFIP2Q9NV92 336 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 KDM5BQ9UGL1 1544 aa8.73□□□□□ -1.01
FN1-219ENST00000474036 BNIP3LO60238 219 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 INHAP05111 366 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 GDF10P55107 478 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 CTBSQ01459 385 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
FN1-219ENST00000474036 DNAAF2Q9NVR5 837 aaKnown RBP8.72□□□□□ -1.01
FN1-219ENST00000474036 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 ATP4AP20648 1035 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 FLIIQ13045 1269 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 PREX1Q8TCU6 1659 aa8.71□□□□□ -1.02
FN1-219ENST00000474036 KIAA0556O60303 1618 aa8.7□□□□□ -1.02
FN1-219ENST00000474036 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms