RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 THBS1P07996 1170 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 ARAFP10398 606 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 FGFR3P22607 806 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 CTBSQ01459 385 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 EFHC2Q5JST6 749 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 CHMP7Q8WUX9 453 aaPredicted RBP4.35□□□□□ -1.71
CALD1-216ENST00000473714 ABHD17AQ96GS6 310 aa4.35□□□□□ -1.71
CALD1-216ENST00000473714 A0A1B0GTH6 734 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 SPDYE3A6NKU9 549 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 HYAL3O43820 417 aaPredicted RBP4.34□□□□□ -1.71
CALD1-216ENST00000473714 PHKA2P46019 1235 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 CLK2P49760 499 aaKnown RBP4.34□□□□□ -1.71
CALD1-216ENST00000473714 NEUROD2Q15784 382 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 FBXO31Q5XUX0 539 aaPredicted RBP4.34□□□□□ -1.71
CALD1-216ENST00000473714 CYP2U1Q7Z449 544 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 CCDC125Q86Z20 511 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 ESF1Q9H501 851 aaKnown RBP4.34□□□□□ -1.71
CALD1-216ENST00000473714 SNAPC4Q5SXM2 1469 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 MAPKBP1O60336 1514 aa4.34□□□□□ -1.71
CALD1-216ENST00000473714 PCF11O94913 1555 aaKnown RBP4.34□□□□□ -1.71
CALD1-216ENST00000473714 CFTRP13569 1480 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 YBX3P16989 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
CALD1-216ENST00000473714 GTF2E1P29083 439 aaPredicted RBP4.33□□□□□ -1.72
CALD1-216ENST00000473714 TXKP42681 527 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 PRRT3Q5FWE3 981 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 CC2D2BQ6DHV5 1058 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 TRIM11Q96F44 468 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 RUBCNLQ9H714 662 aa4.33□□□□□ -1.72
CALD1-216ENST00000473714 PAX4O43316 350 aa4.32□□□□□ -1.72
CALD1-216ENST00000473714 BNIP3LO60238 219 aa4.32□□□□□ -1.72
CALD1-216ENST00000473714 UBAP2LQ14157 1087 aaKnown RBP4.32□□□□□ -1.72
CALD1-216ENST00000473714 RSPH6AQ9H0K4 717 aa4.32□□□□□ -1.72
CALD1-216ENST00000473714 POLR3EQ9NVU0 708 aa4.32□□□□□ -1.72
CALD1-216ENST00000473714 ADH6P28332 368 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 ERVK-9P63128 1117 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 CENPCQ03188 943 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 GNASQ5JWF2 1037 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 MCTP1Q6DN14 999 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 NACC1Q96RE7 527 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 ARHGEF10LQ9HCE6 1279 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 NDFIP2Q9NV92 336 aa4.31□□□□□ -1.72
CALD1-216ENST00000473714 TARBP1Q13395 1621 aaKnown RBP4.31□□□□□ -1.72
CALD1-216ENST00000473714 MED1Q15648 1581 aaPredicted RBP4.31□□□□□ -1.72
CALD1-216ENST00000473714 PTPRMP28827 1452 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 COL17A1Q9UMD9 1497 aaPredicted RBP4.3□□□□□ -1.72
CALD1-216ENST00000473714 GIGYF1O75420 1035 aaPredicted RBP4.3□□□□□ -1.72
CALD1-216ENST00000473714 MSX1P28360 303 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 PDE4DQ08499 809 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 RNF20Q5VTR2 975 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 TMEM214Q6NUQ4 689 aaKnown RBP4.3□□□□□ -1.72
CALD1-216ENST00000473714 FIGNL1Q6PIW4 674 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 EPS8L1Q8TE68 723 aa4.3□□□□□ -1.72
CALD1-216ENST00000473714 ZSCAN10Q96SZ4 725 aaPredicted RBP4.3□□□□□ -1.72
CALD1-216ENST00000473714 H2AFB1P0C5Y9 115 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 H2AFB2P0C5Z0 115 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 CNKSR1Q969H4 720 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 AK7Q96M32 723 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 ARXQ96QS3 562 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 ESYT1Q9BSJ8 1104 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 SLC24A3Q9HC58 644 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 PCDHB9Q9Y5E1 797 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 PCDHGC4Q9Y5F7 938 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 IQSEC2Q5JU85 1478 aa4.29□□□□□ -1.72
CALD1-216ENST00000473714 PPRC1Q5VV67 1664 aaKnown RBP4.29□□□□□ -1.72
CALD1-216ENST00000473714 TOPBP1Q92547 1522 aa4.28□□□□□ -1.72
CALD1-216ENST00000473714 HSPA2P54652 639 aa4.28□□□□□ -1.72
CALD1-216ENST00000473714 BRPF1P55201 1214 aaPredicted RBP4.28□□□□□ -1.72
CALD1-216ENST00000473714 TRIM28Q13263 835 aaKnown RBP4.28□□□□□ -1.72
CALD1-216ENST00000473714 ZCCHC2Q9C0B9 1178 aaKnown RBP4.28□□□□□ -1.72
CALD1-216ENST00000473714 AVENQ9NQS1 362 aaPredicted RBP4.28□□□□□ -1.72
CALD1-216ENST00000473714 RAB6BQ9NRW1 208 aa4.28□□□□□ -1.72
CALD1-216ENST00000473714 PRR12Q9ULL5 1215 aa4.28□□□□□ -1.72
CALD1-216ENST00000473714 MAGI1Q96QZ7 1491 aaPredicted RBP4.28□□□□□ -1.72
CALD1-216ENST00000473714 ABCC8Q09428 1581 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 AP1G2O75843 785 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 GNRH1P01148 92 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 ALAS2P22557 587 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 C4orf17Q53FE4 359 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 FCHSD1Q86WN1 690 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 CRISPLD1Q9H336 500 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 HMX1Q9NP08 348 aaPredicted RBP4.27□□□□□ -1.73
CALD1-216ENST00000473714 KLF15Q9UIH9 416 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 ATP1B4Q9UN42 357 aaPredicted RBP4.27□□□□□ -1.73
CALD1-216ENST00000473714 MROH2BQ7Z745 1585 aa4.27□□□□□ -1.73
CALD1-216ENST00000473714 PRDM2Q13029 1718 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 TRAK2O60296 914 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 ELNP15502 786 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 SCTRP47872 440 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 HOMEZQ8IX15 550 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 OSBPL3Q9H4L5 887 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 CEP170Q5SW79 1584 aa4.26□□□□□ -1.73
CALD1-216ENST00000473714 C9orf172C9J069 976 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 FAM229AH3BQW9 127 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 ATXN7O15265 892 aaPredicted RBP4.25□□□□□ -1.73
CALD1-216ENST00000473714 IL2RAP01589 272 aa4.25□□□□□ -1.73
CALD1-216ENST00000473714 PCBP4P57723 403 aaKnown RBP4.25□□□□□ -1.73
CALD1-216ENST00000473714 FZD5Q13467 585 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms