RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PRAMEF22A3QJZ6 481 aa23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 EIF5P55010 431 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 PPP1R1BQ9UD71 204 aaPredicted RBP23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 TSPYL4Q9UJ04 414 aa23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 QSER1Q2KHR3 1735 aa23.18■■□□□ 1.3
RPUSD3-214ENST00000473522 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
RPUSD3-214ENST00000473522 NLGN1Q8N2Q7 840 aa23.17■■□□□ 1.3
RPUSD3-214ENST00000473522 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
RPUSD3-214ENST00000473522 A1BGP04217 495 aa23.16■■□□□ 1.3
RPUSD3-214ENST00000473522 GYS1P13807 737 aa23.16■■□□□ 1.3
RPUSD3-214ENST00000473522 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
RPUSD3-214ENST00000473522 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
RPUSD3-214ENST00000473522 ZNF853P0CG23 659 aa23.15■■□□□ 1.3
RPUSD3-214ENST00000473522 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
RPUSD3-214ENST00000473522 MSL1Q68DK7 614 aa23.15■■□□□ 1.3
RPUSD3-214ENST00000473522 CCER2I3L3R5 266 aa23.14■■□□□ 1.29
RPUSD3-214ENST00000473522 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-214ENST00000473522 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-214ENST00000473522 NARFQ9UHQ1 456 aa23.13■■□□□ 1.29
RPUSD3-214ENST00000473522 UBR2Q8IWV8 1755 aa23.13■■□□□ 1.29
RPUSD3-214ENST00000473522 TJP1Q07157 1748 aa23.13■■□□□ 1.29
RPUSD3-214ENST00000473522 A0A087WZG4 1122 aa23.12■■□□□ 1.29
RPUSD3-214ENST00000473522 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
RPUSD3-214ENST00000473522 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
RPUSD3-214ENST00000473522 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
RPUSD3-214ENST00000473522 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
RPUSD3-214ENST00000473522 FHDC1Q9C0D6 1143 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-214ENST00000473522 SRP68Q9UHB9 627 aaKnown RBP23.11■■□□□ 1.29
RPUSD3-214ENST00000473522 NBPF26B4DH59 902 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 ZPR1O75312 459 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 NBPF10Q6P3W6 841 aaKnown RBP23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 WWC1Q8IX03 1113 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 NBPF15Q8N660 670 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 IFT57Q9NWB7 429 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 UBR3Q6ZT12 1888 aa23.1■■□□□ 1.29
RPUSD3-214ENST00000473522 USPL1Q5W0Q7 1092 aa23.09■■□□□ 1.29
RPUSD3-214ENST00000473522 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
RPUSD3-214ENST00000473522 COL15A1P39059 1388 aa23.09■■□□□ 1.29
RPUSD3-214ENST00000473522 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 TM4SF1P30408 202 aa23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 GNAI1P63096 354 aa23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 FKBP8Q14318 412 aa23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 LAS1LQ9Y4W2 734 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 MYH14Q7Z406 1995 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-214ENST00000473522 MMP10P09238 476 aa23.07■■□□□ 1.28
RPUSD3-214ENST00000473522 BCL2L12Q9HB09 334 aa23.07■■□□□ 1.28
RPUSD3-214ENST00000473522 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
RPUSD3-214ENST00000473522 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
RPUSD3-214ENST00000473522 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-214ENST00000473522 CD2APQ9Y5K6 639 aa23.06■■□□□ 1.28
RPUSD3-214ENST00000473522 COL24A1Q17RW2 1714 aa23.05■■□□□ 1.28
RPUSD3-214ENST00000473522 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
RPUSD3-214ENST00000473522 PIP4K2AP48426 406 aaPredicted RBP23.04■■□□□ 1.28
RPUSD3-214ENST00000473522 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-214ENST00000473522 IL16Q14005 1332 aa23.04■■□□□ 1.28
RPUSD3-214ENST00000473522 ERBB4Q15303 1308 aa23.04■■□□□ 1.28
RPUSD3-214ENST00000473522 RGL2O15211 777 aa23.03■■□□□ 1.28
RPUSD3-214ENST00000473522 HOXB7P09629 217 aa23.03■■□□□ 1.28
RPUSD3-214ENST00000473522 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
RPUSD3-214ENST00000473522 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
RPUSD3-214ENST00000473522 CAMTA2O94983 1202 aa23.02■■□□□ 1.28
RPUSD3-214ENST00000473522 PDIA6Q15084 440 aa23.02■■□□□ 1.28
RPUSD3-214ENST00000473522 KRT24Q2M2I5 525 aa23.02■■□□□ 1.28
RPUSD3-214ENST00000473522 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
RPUSD3-214ENST00000473522 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
RPUSD3-214ENST00000473522 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
RPUSD3-214ENST00000473522 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
RPUSD3-214ENST00000473522 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
RPUSD3-214ENST00000473522 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
RPUSD3-214ENST00000473522 DDR1Q08345 913 aa23■■□□□ 1.27
RPUSD3-214ENST00000473522 NFIXQ14938 502 aa23■■□□□ 1.27
RPUSD3-214ENST00000473522 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
RPUSD3-214ENST00000473522 MIER1Q8N108 512 aa23■■□□□ 1.27
RPUSD3-214ENST00000473522 POLRMTO00411 1230 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-214ENST00000473522 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
RPUSD3-214ENST00000473522 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-214ENST00000473522 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
RPUSD3-214ENST00000473522 ERVV-1B6SEH8 477 aa22.96■■□□□ 1.27
RPUSD3-214ENST00000473522 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
RPUSD3-214ENST00000473522 C8orf58Q8NAV2 365 aa22.96■■□□□ 1.27
RPUSD3-214ENST00000473522 MYL6BP14649 208 aa22.95■■□□□ 1.26
RPUSD3-214ENST00000473522 TBC1D9BQ66K14 1250 aa22.95■■□□□ 1.26
RPUSD3-214ENST00000473522 DDX21Q9NR30 783 aaKnown RBP eCLIP22.95■■□□□ 1.26
RPUSD3-214ENST00000473522 ZNF521Q96K83 1311 aa22.94■■□□□ 1.26
RPUSD3-214ENST00000473522 SERPINB2P05120 415 aa22.94■■□□□ 1.26
RPUSD3-214ENST00000473522 TGFB2P61812 414 aa22.94■■□□□ 1.26
RPUSD3-214ENST00000473522 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
RPUSD3-214ENST00000473522 HDGFL1Q5TGJ6 251 aa22.93■■□□□ 1.26
RPUSD3-214ENST00000473522 TTLL7Q6ZT98 887 aa22.93■■□□□ 1.26
RPUSD3-214ENST00000473522 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
RPUSD3-214ENST00000473522 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
RPUSD3-214ENST00000473522 HLFQ16534 295 aa22.92■■□□□ 1.26
RPUSD3-214ENST00000473522 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
RPUSD3-214ENST00000473522 SETDB2Q96T68 719 aa22.92■■□□□ 1.26
RPUSD3-214ENST00000473522 DBF4Q9UBU7 674 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-214ENST00000473522 ZNF652Q9Y2D9 606 aa22.92■■□□□ 1.26
RPUSD3-214ENST00000473522 MAP3K15Q6ZN16 1313 aa22.91■■□□□ 1.26
RPUSD3-214ENST00000473522 ELL2O00472 640 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-214ENST00000473522 BICDL1Q6ZP65 573 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms